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Chlorine in PDB 1oj4: Ternary Complex of 4-Diphosphocytidyl-2-C-Methyl-D-Erythritol Kinase

Enzymatic activity of Ternary Complex of 4-Diphosphocytidyl-2-C-Methyl-D-Erythritol Kinase

All present enzymatic activity of Ternary Complex of 4-Diphosphocytidyl-2-C-Methyl-D-Erythritol Kinase:
2.7.1.148;

Protein crystallography data

The structure of Ternary Complex of 4-Diphosphocytidyl-2-C-Methyl-D-Erythritol Kinase, PDB code: 1oj4 was solved by L.Miallau, M.S.Alphey, W.N.Hunter, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 65.94 / 2.01
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 61.000, 76.300, 68.600, 90.00, 107.80, 90.00
R / Rfree (%) 16.6 / 20.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Ternary Complex of 4-Diphosphocytidyl-2-C-Methyl-D-Erythritol Kinase (pdb code 1oj4). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Ternary Complex of 4-Diphosphocytidyl-2-C-Methyl-D-Erythritol Kinase, PDB code: 1oj4:

Chlorine binding site 1 out of 1 in 1oj4

Go back to Chlorine Binding Sites List in 1oj4
Chlorine binding site 1 out of 1 in the Ternary Complex of 4-Diphosphocytidyl-2-C-Methyl-D-Erythritol Kinase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Ternary Complex of 4-Diphosphocytidyl-2-C-Methyl-D-Erythritol Kinase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1286

b:13.4
occ:1.00
O A:HOH2096 2.9 12.9 1.0
O A:HOH2095 3.1 21.8 1.0
NH2 A:ARG147 3.3 11.7 1.0
NE A:ARG147 3.3 10.3 1.0
CZ A:ARG147 3.8 13.2 1.0
CB A:ARG147 3.9 10.1 1.0
CG A:PRO162 4.1 8.5 1.0
CD2 A:HIS149 4.2 10.3 1.0
CB A:PRO162 4.2 8.4 1.0
CB A:HIS149 4.3 7.8 1.0
O A:HOH2098 4.3 13.1 1.0
CG A:HIS149 4.5 10.8 1.0
CD A:ARG147 4.5 10.6 1.0
CG A:ARG147 4.5 10.1 1.0
CD A:PRO162 4.6 8.5 1.0
O A:ARG147 4.6 9.4 1.0
C A:ARG147 5.0 9.0 1.0
CA A:ARG147 5.0 9.7 1.0

Reference:

L.Miallau, M.S.Alphey, L.E.Kemp, G.A.Leonard, S.M.Mcsweeney, S.Hecht, A.Bacher, W.Eisenreich, F.Rohdich, W.N.Hunter. Biosynthesis of Isoprenoids: Crystal Structure of 4-Diphosphocytidyl-2C-Methyl-D-Erythritol Kinase Proc.Natl.Acad.Sci.Usa V. 100 9173 2003.
ISSN: ISSN 0027-8424
PubMed: 12878729
DOI: 10.1073/PNAS.1533425100
Page generated: Sat Jul 20 00:56:07 2024

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