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Chlorine in PDB 1ov7: T4 Lysozyme Cavity Mutant L99A/M102Q Bound with 2-Allyl-6- Methyl-Phenol

Enzymatic activity of T4 Lysozyme Cavity Mutant L99A/M102Q Bound with 2-Allyl-6- Methyl-Phenol

All present enzymatic activity of T4 Lysozyme Cavity Mutant L99A/M102Q Bound with 2-Allyl-6- Methyl-Phenol:
3.2.1.17;

Protein crystallography data

The structure of T4 Lysozyme Cavity Mutant L99A/M102Q Bound with 2-Allyl-6- Methyl-Phenol, PDB code: 1ov7 was solved by B.Q.Wei, W.A.Baase, L.H.Weaver, B.W.Matthews, B.K.Shoichet, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 13.00 / 2.00
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 60.800, 60.800, 97.400, 90.00, 90.00, 120.00
R / Rfree (%) n/a / n/a

Chlorine Binding Sites:

The binding sites of Chlorine atom in the T4 Lysozyme Cavity Mutant L99A/M102Q Bound with 2-Allyl-6- Methyl-Phenol (pdb code 1ov7). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the T4 Lysozyme Cavity Mutant L99A/M102Q Bound with 2-Allyl-6- Methyl-Phenol, PDB code: 1ov7:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1ov7

Go back to Chlorine Binding Sites List in 1ov7
Chlorine binding site 1 out of 2 in the T4 Lysozyme Cavity Mutant L99A/M102Q Bound with 2-Allyl-6- Methyl-Phenol


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of T4 Lysozyme Cavity Mutant L99A/M102Q Bound with 2-Allyl-6- Methyl-Phenol within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl173

b:53.8
occ:1.00
N A:ARG145 3.1 7.8 1.0
N A:ASN144 3.2 8.0 1.0
C A:THR142 3.4 12.6 1.0
CA A:THR142 3.5 1.0 1.0
CB A:THR142 3.6 3.2 1.0
CB A:ASN144 3.6 13.9 1.0
O A:THR142 3.6 5.1 1.0
CA A:ASN144 3.8 8.1 1.0
N A:PRO143 3.8 14.3 1.0
CB A:ARG145 3.8 14.9 1.0
C A:ASN144 4.0 15.9 1.0
CA A:ARG145 4.0 1.0 1.0
C A:PRO143 4.1 9.2 1.0
CG A:ASN144 4.2 89.5 1.0
CD A:PRO143 4.3 21.5 1.0
CG2 A:THR142 4.3 3.6 1.0
ND2 A:ASN144 4.5 21.6 1.0
CA A:PRO143 4.5 17.8 1.0
OG1 A:THR142 4.6 10.1 1.0
O A:HOH207 4.8 25.7 1.0
N A:THR142 4.9 6.4 1.0

Chlorine binding site 2 out of 2 in 1ov7

Go back to Chlorine Binding Sites List in 1ov7
Chlorine binding site 2 out of 2 in the T4 Lysozyme Cavity Mutant L99A/M102Q Bound with 2-Allyl-6- Methyl-Phenol


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of T4 Lysozyme Cavity Mutant L99A/M102Q Bound with 2-Allyl-6- Methyl-Phenol within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl178

b:42.9
occ:1.00
O A:ALA49 2.9 11.7 1.0
NE2 A:GLN69 3.0 11.0 1.0
O A:HOH282 3.2 16.5 1.0
O A:HOH183 3.5 26.9 1.0
O A:HOH239 3.7 32.0 1.0
C A:ALA49 3.8 24.6 1.0
CA A:ALA49 3.8 20.4 1.0
CD2 A:LEU66 4.0 12.8 1.0
CD A:GLN69 4.1 25.1 1.0
CB A:ALA49 4.1 20.3 1.0
OE1 A:GLN69 4.2 13.4 1.0
O A:HOH182 4.5 24.6 1.0

Reference:

B.Q.Wei, L.H.Weaver, A.M.Ferrari, B.W.Matthews, B.K.Shoichet. Testing A Flexible-Receptor Docking Algorithm in A Model Binding Site J.Mol.Biol. V. 337 1161 2004.
ISSN: ISSN 0022-2836
PubMed: 15046985
DOI: 10.1016/J.JMB.2004.02.015
Page generated: Sat Jul 20 01:03:34 2024

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