Atomistry » Chlorine » PDB 1p6y-1pqo » 1pqd
Atomistry »
  Chlorine »
    PDB 1p6y-1pqo »
      1pqd »

Chlorine in PDB 1pqd: T4 Lysozyme Core Repacking Mutant CORE10/Ta

Enzymatic activity of T4 Lysozyme Core Repacking Mutant CORE10/Ta

All present enzymatic activity of T4 Lysozyme Core Repacking Mutant CORE10/Ta:
3.2.1.17;

Protein crystallography data

The structure of T4 Lysozyme Core Repacking Mutant CORE10/Ta, PDB code: 1pqd was solved by B.H.Mooers, D.Datta, W.A.Baase, E.S.Zollars, S.L.Mayo, B.W.Matthews, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 16.30 / 1.65
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 59.972, 59.972, 96.659, 90.00, 90.00, 120.00
R / Rfree (%) n/a / n/a

Other elements in 1pqd:

The structure of T4 Lysozyme Core Repacking Mutant CORE10/Ta also contains other interesting chemical elements:

Potassium (K) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the T4 Lysozyme Core Repacking Mutant CORE10/Ta (pdb code 1pqd). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the T4 Lysozyme Core Repacking Mutant CORE10/Ta, PDB code: 1pqd:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1pqd

Go back to Chlorine Binding Sites List in 1pqd
Chlorine binding site 1 out of 2 in the T4 Lysozyme Core Repacking Mutant CORE10/Ta


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of T4 Lysozyme Core Repacking Mutant CORE10/Ta within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl173

b:11.4
occ:0.51
O A:HOH209 3.0 19.7 1.0
O A:HOH291 3.0 65.3 1.0
N A:ARG145 3.2 15.0 1.0
N A:ASN144 3.4 10.3 1.0
C A:THR142 3.5 17.8 1.0
CA A:THR142 3.5 13.3 1.0
CB A:THR142 3.6 17.5 1.0
CB A:ARG145 3.8 12.6 1.0
O A:THR142 3.8 17.5 1.0
CB A:ASN144 3.8 18.8 1.0
N A:PRO143 3.9 15.8 1.0
CA A:ASN144 3.9 13.2 1.0
C A:ASN144 4.0 18.2 1.0
CA A:ARG145 4.1 13.7 1.0
CG2 A:THR142 4.2 15.7 1.0
C A:PRO143 4.3 20.2 1.0
CD A:PRO143 4.3 17.1 1.0
CA A:PRO143 4.6 13.1 1.0
OG1 A:THR142 4.8 14.9 1.0
CG A:ASN144 4.8 30.0 1.0
O A:HOH230 4.9 16.7 1.0
N A:THR142 4.9 11.8 1.0

Chlorine binding site 2 out of 2 in 1pqd

Go back to Chlorine Binding Sites List in 1pqd
Chlorine binding site 2 out of 2 in the T4 Lysozyme Core Repacking Mutant CORE10/Ta


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of T4 Lysozyme Core Repacking Mutant CORE10/Ta within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl178

b:17.8
occ:0.62
O A:HOH182 3.2 16.2 1.0
O A:HOH215 3.2 14.7 1.0
O A:HOH246 3.4 29.7 1.0
O A:HOH200 3.8 31.9 1.0
CE1 A:HIS31 3.8 16.9 1.0
CB A:ALA49 3.8 16.1 1.0
NE2 A:HIS31 4.0 15.2 1.0
CA A:ALA49 4.5 20.7 1.0
OE1 A:GLN69 4.5 20.3 1.0
O A:HOH202 4.7 16.2 0.5
CD2 A:LEU66 4.7 15.3 1.0
ND1 A:HIS31 4.9 12.5 1.0
OD1 A:ASP70 5.0 17.6 1.0

Reference:

B.H.Mooers, D.Datta, W.A.Baase, E.S.Zollars, S.L.Mayo, B.W.Matthews. Repacking the Core of T4 Lysozyme By Automated Design J.Mol.Biol. V. 332 741 2003.
ISSN: ISSN 0022-2836
PubMed: 12963380
DOI: 10.1016/S0022-2836(03)00856-8
Page generated: Sat Jul 20 01:16:40 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy