Atomistry » Chlorine » PDB 1ps9-1qhs » 1qh8
Atomistry »
  Chlorine »
    PDB 1ps9-1qhs »
      1qh8 »

Chlorine in PDB 1qh8: Nitrogenase Mofe Protein From Klebsiella Pneumoniae, As-Crystallized (Mixed Oxidation) State

Enzymatic activity of Nitrogenase Mofe Protein From Klebsiella Pneumoniae, As-Crystallized (Mixed Oxidation) State

All present enzymatic activity of Nitrogenase Mofe Protein From Klebsiella Pneumoniae, As-Crystallized (Mixed Oxidation) State:
1.18.6.1;

Protein crystallography data

The structure of Nitrogenase Mofe Protein From Klebsiella Pneumoniae, As-Crystallized (Mixed Oxidation) State, PDB code: 1qh8 was solved by S.M.Mayer, D.M.Lawson, C.A.Gormal, S.M.Roe, B.E.Smith, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.60
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 203.030, 74.900, 162.120, 90.00, 122.80, 90.00
R / Rfree (%) 15.5 / 19.7

Other elements in 1qh8:

The structure of Nitrogenase Mofe Protein From Klebsiella Pneumoniae, As-Crystallized (Mixed Oxidation) State also contains other interesting chemical elements:

Molybdenum (Mo) 2 atoms
Magnesium (Mg) 7 atoms
Iron (Fe) 34 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Nitrogenase Mofe Protein From Klebsiella Pneumoniae, As-Crystallized (Mixed Oxidation) State (pdb code 1qh8). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Nitrogenase Mofe Protein From Klebsiella Pneumoniae, As-Crystallized (Mixed Oxidation) State, PDB code: 1qh8:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1qh8

Go back to Chlorine Binding Sites List in 1qh8
Chlorine binding site 1 out of 2 in the Nitrogenase Mofe Protein From Klebsiella Pneumoniae, As-Crystallized (Mixed Oxidation) State


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Nitrogenase Mofe Protein From Klebsiella Pneumoniae, As-Crystallized (Mixed Oxidation) State within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl2902

b:17.9
occ:1.00
O B:HOH3097 3.1 16.7 1.0
O B:HOH3106 3.1 16.8 1.0
O B:HOH3048 3.4 12.6 1.0
N B:ASN395 3.5 13.6 1.0
CB B:TRP398 3.7 11.7 1.0
CB B:PRO369 3.7 10.1 1.0
CA B:ALA394 3.8 12.9 1.0
CG B:ASN395 3.8 13.5 1.0
OD1 B:ASN395 3.9 16.2 1.0
CG B:PRO369 3.9 10.6 1.0
ND2 B:ASN395 3.9 17.7 1.0
CE3 B:TRP292 4.1 13.5 1.0
C B:ALA394 4.1 13.4 1.0
CG B:TRP398 4.1 10.2 1.0
CB B:TRP292 4.1 11.6 1.0
O B:HOH3200 4.2 21.1 1.0
CD1 B:TRP398 4.3 11.6 1.0
CB B:ALA394 4.3 13.0 1.0
CB B:ASN395 4.4 11.5 1.0
O B:ASN393 4.5 14.8 1.0
CA B:ASN395 4.5 12.8 1.0
CD2 B:TRP292 4.6 11.8 1.0
O B:TRP292 4.6 16.1 1.0
CG B:TRP292 4.7 9.6 1.0
O B:HOH3418 4.9 33.0 1.0
CZ3 B:TRP292 4.9 15.7 1.0
N B:ALA394 4.9 11.7 1.0
CA B:TRP398 5.0 12.3 1.0
O B:HOH3242 5.0 23.8 1.0

Chlorine binding site 2 out of 2 in 1qh8

Go back to Chlorine Binding Sites List in 1qh8
Chlorine binding site 2 out of 2 in the Nitrogenase Mofe Protein From Klebsiella Pneumoniae, As-Crystallized (Mixed Oxidation) State


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Nitrogenase Mofe Protein From Klebsiella Pneumoniae, As-Crystallized (Mixed Oxidation) State within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl2901

b:14.2
occ:1.00
O D:HOH3123 3.1 16.2 1.0
O D:HOH3102 3.1 13.7 1.0
O D:HOH3056 3.3 11.2 1.0
N D:ASN395 3.5 11.4 1.0
CB D:TRP398 3.7 10.1 1.0
CB D:PRO369 3.7 9.5 1.0
OD1 D:ASN395 3.8 12.9 1.0
CA D:ALA394 3.8 10.4 1.0
CG D:ASN395 3.8 15.0 1.0
CG D:PRO369 3.9 10.1 1.0
CG D:TRP398 4.1 9.9 1.0
ND2 D:ASN395 4.1 15.0 1.0
CB D:TRP292 4.1 11.6 1.0
C D:ALA394 4.1 12.3 1.0
CE3 D:TRP292 4.2 12.0 1.0
CD1 D:TRP398 4.2 12.4 1.0
O D:HOH3156 4.2 17.2 1.0
CB D:ALA394 4.2 10.0 1.0
CB D:ASN395 4.4 10.9 1.0
CA D:ASN395 4.5 13.2 1.0
O D:ASN393 4.6 14.2 1.0
O D:TRP292 4.6 12.5 1.0
CD2 D:TRP292 4.7 12.0 1.0
CG D:TRP292 4.7 9.2 1.0
O D:HOH3500 4.9 33.6 1.0
N D:ALA394 4.9 9.0 1.0
CA D:TRP398 4.9 11.5 1.0

Reference:

S.M.Mayer, D.M.Lawson, C.A.Gormal, S.M.Roe, B.E.Smith. New Insights Into Structure-Function Relationships in Nitrogenase: A 1.6 A Resolution X-Ray Crystallographic Study of Klebsiella Pneumoniae Mofe-Protein. J.Mol.Biol. V. 292 871 1999.
ISSN: ISSN 0022-2836
PubMed: 10525412
DOI: 10.1006/JMBI.1999.3107
Page generated: Sat Jul 20 01:33:00 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy