Atomistry » Chlorine » PDB 1rkq-1s7f » 1s4n
Atomistry »
  Chlorine »
    PDB 1rkq-1s7f »
      1s4n »

Chlorine in PDB 1s4n: Crystal Structure of Yeast ALPHA1,2-Mannosyltransferase KRE2P/MNT1P

Enzymatic activity of Crystal Structure of Yeast ALPHA1,2-Mannosyltransferase KRE2P/MNT1P

All present enzymatic activity of Crystal Structure of Yeast ALPHA1,2-Mannosyltransferase KRE2P/MNT1P:
2.4.1.131;

Protein crystallography data

The structure of Crystal Structure of Yeast ALPHA1,2-Mannosyltransferase KRE2P/MNT1P, PDB code: 1s4n was solved by Y.D.Lobsanov, P.A.Romero, B.Sleno, B.Yu, P.Yip, A.Herscovics, P.L.Howell, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.96 / 2.01
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 60.694, 101.068, 62.036, 90.00, 98.81, 90.00
R / Rfree (%) 18 / 23.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Yeast ALPHA1,2-Mannosyltransferase KRE2P/MNT1P (pdb code 1s4n). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Yeast ALPHA1,2-Mannosyltransferase KRE2P/MNT1P, PDB code: 1s4n:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1s4n

Go back to Chlorine Binding Sites List in 1s4n
Chlorine binding site 1 out of 2 in the Crystal Structure of Yeast ALPHA1,2-Mannosyltransferase KRE2P/MNT1P


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Yeast ALPHA1,2-Mannosyltransferase KRE2P/MNT1P within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl900

b:23.0
occ:1.00
O A:HOH1155 2.7 38.5 1.0
O B:HOH836 2.9 20.5 1.0
N B:TYR214 3.1 17.6 1.0
N A:TYR419 3.3 16.1 1.0
O A:HOH997 3.3 29.5 1.0
CA B:TYR214 3.5 19.4 1.0
CB A:TYR419 3.6 16.9 1.0
N A:GLY418 3.8 16.3 1.0
CA A:TYR419 4.0 16.6 1.0
CA A:GLY418 4.2 15.2 1.0
C A:GLY418 4.2 17.1 1.0
C B:ILE213 4.2 18.6 1.0
CD1 B:ILE213 4.2 19.7 1.0
CB A:GLN417 4.2 18.3 1.0
CD1 B:TYR214 4.3 23.6 1.0
OE1 A:GLN417 4.3 28.3 1.0
C B:TYR214 4.4 19.0 1.0
CA B:ILE213 4.4 18.2 1.0
O A:HOH1198 4.5 48.0 1.0
C A:GLN417 4.5 15.9 1.0
N B:GLY215 4.5 18.8 1.0
CG B:TYR214 4.7 22.1 1.0
CB B:TYR214 4.7 20.0 1.0
CG1 B:ILE213 4.7 18.7 1.0
O B:TYR212 4.8 21.0 1.0
O B:ALA209 4.8 28.4 1.0
CE1 B:TYR214 4.8 25.2 1.0
CA A:GLN417 4.9 15.7 1.0
CG A:TYR419 4.9 18.6 1.0

Chlorine binding site 2 out of 2 in 1s4n

Go back to Chlorine Binding Sites List in 1s4n
Chlorine binding site 2 out of 2 in the Crystal Structure of Yeast ALPHA1,2-Mannosyltransferase KRE2P/MNT1P


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Yeast ALPHA1,2-Mannosyltransferase KRE2P/MNT1P within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl901

b:19.2
occ:1.00
O A:HOH907 3.0 19.8 1.0
N A:TYR214 3.1 16.5 1.0
N B:TYR419 3.3 12.8 1.0
O B:HOH921 3.5 37.0 1.0
CB B:TYR419 3.6 14.9 1.0
CA A:TYR214 3.6 19.1 1.0
N B:GLY418 3.7 12.8 1.0
CD1 A:ILE213 4.0 16.9 1.0
CA B:GLY418 4.1 11.3 1.0
CA B:TYR419 4.1 14.3 1.0
C B:GLY418 4.2 12.8 1.0
CB B:GLN417 4.2 14.7 1.0
C A:ILE213 4.2 17.8 1.0
CD1 A:TYR214 4.3 25.2 1.0
CA A:ILE213 4.4 16.3 1.0
C B:GLN417 4.4 13.9 1.0
OE1 B:GLN417 4.5 21.9 1.0
C A:TYR214 4.5 17.8 1.0
N A:GLY215 4.6 17.3 1.0
CG1 A:ILE213 4.6 16.0 1.0
O A:ALA209 4.7 26.5 1.0
O B:HOH1029 4.8 38.8 1.0
CG A:TYR214 4.8 24.8 1.0
CA B:GLN417 4.8 13.8 1.0
CB A:TYR214 4.8 21.0 1.0
O A:TYR212 4.9 18.7 1.0
CE1 A:TYR214 4.9 28.7 1.0
CG B:TYR419 4.9 15.3 1.0
CE1 B:PHE414 5.0 13.2 1.0

Reference:

Y.D.Lobsanov, P.A.Romero, B.Sleno, B.Yu, P.Yip, A.Herscovics, P.L.Howell. Structure of KRE2P/MNT1P: A Yeast {Alpha}1,2-Mannosyltransferase Involved in Mannoprotein Biosynthesis J.Biol.Chem. V. 279 17921 2004.
ISSN: ISSN 0021-9258
PubMed: 14752117
DOI: 10.1074/JBC.M312720200
Page generated: Sat Dec 12 08:48:34 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy