Chlorine in PDB 1sr7: Progesterone Receptor Hormone Binding Domain with Bound Mometasone Furoate
Protein crystallography data
The structure of Progesterone Receptor Hormone Binding Domain with Bound Mometasone Furoate, PDB code: 1sr7
was solved by
K.P.Madauss,
S.-J.Deng,
R.J.Austin,
M.H.Lambert,
I.Mclay,
J.Pritchard,
S.A.Short,
E.L.Stewart,
I.J.Uings,
S.P.Williams,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
19.96 /
1.46
|
Space group
|
P 1 21 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
58.112,
64.256,
70.091,
90.00,
96.88,
90.00
|
R / Rfree (%)
|
17.4 /
21.1
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Progesterone Receptor Hormone Binding Domain with Bound Mometasone Furoate
(pdb code 1sr7). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the
Progesterone Receptor Hormone Binding Domain with Bound Mometasone Furoate, PDB code: 1sr7:
Jump to Chlorine binding site number:
1;
2;
3;
4;
Chlorine binding site 1 out
of 4 in 1sr7
Go back to
Chlorine Binding Sites List in 1sr7
Chlorine binding site 1 out
of 4 in the Progesterone Receptor Hormone Binding Domain with Bound Mometasone Furoate
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Progesterone Receptor Hormone Binding Domain with Bound Mometasone Furoate within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl301
b:23.6
occ:1.00
|
CL25
|
A:MOF301
|
0.0
|
23.6
|
1.0
|
C19
|
A:MOF301
|
1.8
|
14.0
|
1.0
|
C15
|
A:MOF301
|
2.6
|
18.0
|
1.0
|
C14
|
A:MOF301
|
2.7
|
17.6
|
1.0
|
C24
|
A:MOF301
|
2.8
|
16.3
|
1.0
|
C20
|
A:MOF301
|
3.0
|
18.3
|
1.0
|
C29
|
A:MOF301
|
3.0
|
17.3
|
1.0
|
C7
|
A:MOF301
|
3.0
|
14.9
|
1.0
|
C6
|
A:MOF301
|
3.2
|
17.6
|
1.0
|
C30
|
A:MOF301
|
3.2
|
19.2
|
1.0
|
CE2
|
A:PHE778
|
3.6
|
17.2
|
1.0
|
C26
|
A:MOF301
|
3.7
|
22.1
|
1.0
|
C2
|
A:MOF301
|
3.7
|
16.5
|
1.0
|
C32
|
A:MOF301
|
3.7
|
18.4
|
1.0
|
C33
|
A:MOF301
|
3.8
|
19.1
|
1.0
|
O21
|
A:MOF301
|
4.0
|
21.9
|
1.0
|
CD2
|
A:PHE778
|
4.0
|
16.1
|
1.0
|
O4
|
A:MOF301
|
4.1
|
18.1
|
1.0
|
C34
|
A:MOF301
|
4.1
|
23.6
|
1.0
|
CD2
|
A:LEU718
|
4.1
|
17.6
|
1.0
|
CB
|
A:LEU718
|
4.2
|
14.7
|
1.0
|
C22
|
A:MOF301
|
4.2
|
14.1
|
1.0
|
C31
|
A:MOF301
|
4.2
|
16.3
|
1.0
|
CG
|
A:LEU718
|
4.5
|
13.3
|
1.0
|
C9
|
A:MOF301
|
4.5
|
19.6
|
1.0
|
CD1
|
A:LEU718
|
4.5
|
15.8
|
1.0
|
CE
|
A:MET801
|
4.6
|
19.1
|
1.0
|
C1
|
A:MOF301
|
4.6
|
14.9
|
1.0
|
SD
|
A:MET801
|
4.7
|
23.4
|
1.0
|
CZ
|
A:PHE778
|
4.7
|
16.5
|
1.0
|
C8
|
A:MOF301
|
4.8
|
20.8
|
1.0
|
O35
|
A:MOF301
|
5.0
|
26.8
|
1.0
|
|
Chlorine binding site 2 out
of 4 in 1sr7
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Chlorine Binding Sites List in 1sr7
Chlorine binding site 2 out
of 4 in the Progesterone Receptor Hormone Binding Domain with Bound Mometasone Furoate
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Progesterone Receptor Hormone Binding Domain with Bound Mometasone Furoate within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl301
b:36.3
occ:1.00
|
CL18
|
A:MOF301
|
0.0
|
36.3
|
1.0
|
C12
|
A:MOF301
|
1.7
|
17.7
|
1.0
|
C5
|
A:MOF301
|
2.6
|
18.1
|
1.0
|
O13
|
A:MOF301
|
2.8
|
21.7
|
1.0
|
O17
|
A:MOF301
|
3.6
|
20.1
|
1.0
|
CG2
|
A:THR894
|
3.6
|
18.5
|
1.0
|
CZ
|
A:PHE905
|
3.7
|
18.9
|
1.0
|
C1
|
A:MOF301
|
4.0
|
14.9
|
1.0
|
CG1
|
A:VAL903
|
4.0
|
23.0
|
1.0
|
ND2
|
A:ASN719
|
4.1
|
19.4
|
1.0
|
CB
|
A:THR894
|
4.1
|
16.4
|
1.0
|
CD2
|
A:LEU715
|
4.1
|
20.2
|
1.0
|
C11
|
A:MOF301
|
4.2
|
17.1
|
1.0
|
OG1
|
A:THR894
|
4.2
|
18.8
|
1.0
|
CB
|
A:LEU715
|
4.2
|
18.9
|
1.0
|
OD1
|
A:ASN719
|
4.3
|
17.6
|
1.0
|
CE2
|
A:PHE905
|
4.4
|
21.6
|
1.0
|
CD1
|
A:LEU715
|
4.4
|
24.3
|
1.0
|
O4
|
A:MOF301
|
4.4
|
18.1
|
1.0
|
CG
|
A:LEU715
|
4.4
|
18.7
|
1.0
|
CE2
|
A:TYR890
|
4.5
|
21.3
|
1.0
|
CE1
|
A:PHE905
|
4.5
|
16.2
|
1.0
|
CG
|
A:ASN719
|
4.6
|
18.8
|
1.0
|
C2
|
A:MOF301
|
4.7
|
16.5
|
1.0
|
CD2
|
A:TYR890
|
4.8
|
18.3
|
1.0
|
C7
|
A:MOF301
|
4.9
|
14.9
|
1.0
|
C8
|
A:MOF301
|
4.9
|
20.8
|
1.0
|
|
Chlorine binding site 3 out
of 4 in 1sr7
Go back to
Chlorine Binding Sites List in 1sr7
Chlorine binding site 3 out
of 4 in the Progesterone Receptor Hormone Binding Domain with Bound Mometasone Furoate
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Progesterone Receptor Hormone Binding Domain with Bound Mometasone Furoate within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl302
b:24.6
occ:1.00
|
CL25
|
B:MOF302
|
0.0
|
24.6
|
1.0
|
C19
|
B:MOF302
|
1.9
|
15.2
|
1.0
|
C24
|
B:MOF302
|
2.7
|
16.9
|
1.0
|
C15
|
B:MOF302
|
2.7
|
16.0
|
1.0
|
C14
|
B:MOF302
|
2.8
|
16.3
|
1.0
|
C29
|
B:MOF302
|
3.0
|
15.9
|
1.0
|
C30
|
B:MOF302
|
3.1
|
16.8
|
1.0
|
C20
|
B:MOF302
|
3.1
|
17.9
|
1.0
|
C7
|
B:MOF302
|
3.1
|
17.5
|
1.0
|
C6
|
B:MOF302
|
3.2
|
18.3
|
1.0
|
CE2
|
B:PHE778
|
3.5
|
12.4
|
1.0
|
C26
|
B:MOF302
|
3.7
|
19.0
|
1.0
|
C2
|
B:MOF302
|
3.7
|
16.4
|
1.0
|
C32
|
B:MOF302
|
3.7
|
19.5
|
1.0
|
C33
|
B:MOF302
|
3.8
|
19.7
|
1.0
|
CD2
|
B:PHE778
|
3.9
|
13.3
|
1.0
|
C34
|
B:MOF302
|
3.9
|
19.2
|
1.0
|
O21
|
B:MOF302
|
3.9
|
21.8
|
1.0
|
O23
|
B:MOF302
|
4.0
|
21.9
|
1.0
|
CD2
|
B:LEU718
|
4.1
|
17.2
|
1.0
|
CB
|
B:LEU718
|
4.1
|
14.1
|
1.0
|
C31
|
B:MOF302
|
4.1
|
18.8
|
1.0
|
O4
|
B:MOF302
|
4.1
|
18.7
|
1.0
|
CD1
|
B:LEU718
|
4.2
|
19.0
|
1.0
|
CG
|
B:LEU718
|
4.3
|
16.1
|
1.0
|
C9
|
B:MOF302
|
4.5
|
18.7
|
1.0
|
CZ
|
B:PHE778
|
4.6
|
15.0
|
1.0
|
C1
|
B:MOF302
|
4.6
|
19.4
|
1.0
|
SD
|
B:MET801
|
4.7
|
23.3
|
1.0
|
CE
|
B:MET801
|
4.8
|
20.4
|
1.0
|
O35
|
B:MOF302
|
4.8
|
23.4
|
1.0
|
C28
|
B:MOF302
|
4.8
|
23.6
|
1.0
|
C8
|
B:MOF302
|
4.8
|
20.1
|
1.0
|
|
Chlorine binding site 4 out
of 4 in 1sr7
Go back to
Chlorine Binding Sites List in 1sr7
Chlorine binding site 4 out
of 4 in the Progesterone Receptor Hormone Binding Domain with Bound Mometasone Furoate
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Progesterone Receptor Hormone Binding Domain with Bound Mometasone Furoate within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl302
b:44.9
occ:1.00
|
CL18
|
B:MOF302
|
0.0
|
44.9
|
1.0
|
C12
|
B:MOF302
|
1.7
|
27.5
|
1.0
|
C5
|
B:MOF302
|
2.5
|
22.8
|
1.0
|
O13
|
B:MOF302
|
2.7
|
26.0
|
1.0
|
CG2
|
B:THR894
|
3.4
|
16.4
|
1.0
|
ND2
|
B:ASN719
|
3.6
|
18.5
|
1.0
|
CZ
|
B:PHE905
|
3.6
|
18.8
|
1.0
|
CB
|
B:THR894
|
3.8
|
13.6
|
1.0
|
C1
|
B:MOF302
|
4.0
|
19.4
|
1.0
|
OD1
|
B:ASN719
|
4.0
|
17.4
|
1.0
|
CE2
|
B:PHE905
|
4.1
|
18.2
|
1.0
|
CG
|
B:ASN719
|
4.2
|
15.9
|
1.0
|
OG1
|
B:THR894
|
4.2
|
16.8
|
1.0
|
CG1
|
B:VAL903
|
4.2
|
15.6
|
1.0
|
O17
|
B:MOF302
|
4.2
|
20.7
|
1.0
|
CD1
|
B:LEU715
|
4.2
|
21.2
|
1.0
|
CB
|
B:LEU715
|
4.4
|
14.4
|
1.0
|
C8
|
B:MOF302
|
4.4
|
20.1
|
1.0
|
C2
|
B:MOF302
|
4.4
|
16.4
|
1.0
|
C7
|
B:MOF302
|
4.5
|
17.5
|
1.0
|
CE1
|
B:PHE905
|
4.5
|
15.6
|
1.0
|
O4
|
B:MOF302
|
4.6
|
18.7
|
1.0
|
CD2
|
B:LEU715
|
4.6
|
17.6
|
1.0
|
CG
|
B:LEU715
|
4.7
|
14.7
|
1.0
|
C11
|
B:MOF302
|
4.7
|
18.8
|
1.0
|
CA
|
B:CYS891
|
5.0
|
11.8
|
1.0
|
|
Reference:
K.P.Madauss,
S.-J.Deng,
R.J.Austin,
M.H.Lambert,
I.Mclay,
J.Pritchard,
S.A.Short,
E.L.Stewart,
I.J.Uings,
S.P.Williams.
Progesterone Receptor Ligand Binding Pocket Flexibility: Crystal Structures of the Norethindrone and Mometasone Furoate Complexes J.Med.Chem. V. 47 3381 2004.
ISSN: ISSN 0022-2623
PubMed: 15189034
DOI: 10.1021/JM030640N
Page generated: Sat Jul 20 02:15:06 2024
|