Chlorine in PDB 1svf: Paramyxovirus SV5 Fusion Protein Core

The structure of Paramyxovirus SV5 Fusion Protein Core, PDB code: 1svf was solved by K.A.Baker, R.E.Dutch, R.A.Lamb, T.S.Jardetzky, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.00 / 1.40
Space group	P 3
Cell size a, b, c (Å), α, β, γ (°)	41.600, 41.600, 95.600, 90.00, 90.00, 120.00
R / Rfree (%)	18.1 / 20.2

The binding sites of Chlorine atom in the Paramyxovirus SV5 Fusion Protein Core (pdb code 1svf). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Paramyxovirus SV5 Fusion Protein Core, PDB code: 1svf:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in the Paramyxovirus SV5 Fusion Protein Core


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Paramyxovirus SV5 Fusion Protein Core within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl101 b:18.8 occ:0.33 OG1 A:THR158 3.0 15.0 1.0 CG2 A:THR158 3.8 15.2 1.0 CB A:THR158 3.8 10.8 1.0 CA A:THR158 4.2 10.0 1.0 N A:THR158 4.8 9.7 1.0 CG1 A:VAL154 4.9 13.9 1.0

Chlorine binding site 2 out of 4 in the Paramyxovirus SV5 Fusion Protein Core


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Paramyxovirus SV5 Fusion Protein Core within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl103 b:2.3 occ:0.33 ND2 A:ASN133 3.3 13.8 1.0 CA A:ALA130 3.7 11.3 1.0 CB A:ASN133 3.9 10.7 1.0 CB A:ALA130 4.0 12.8 1.0 CG A:ASN133 4.1 11.8 1.0 N A:ALA130 4.5 10.4 1.0 O A:ALA130 4.5 12.2 1.0 C A:ALA130 4.6 12.5 1.0 O A:LYS129 4.7 12.2 1.0 C A:LYS129 4.8 10.1 1.0

Chlorine binding site 3 out of 4 in the Paramyxovirus SV5 Fusion Protein Core


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Paramyxovirus SV5 Fusion Protein Core within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl100 b:19.5 occ:0.33 OG1 C:THR158 2.9 12.4 1.0 CB C:THR158 3.7 9.0 1.0 CG2 C:THR158 3.7 11.9 1.0 CA C:THR158 4.1 9.9 1.0 N C:THR158 4.7 7.8 1.0 CG1 C:VAL154 4.9 12.0 1.0

Chlorine binding site 4 out of 4 in the Paramyxovirus SV5 Fusion Protein Core


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Paramyxovirus SV5 Fusion Protein Core within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl102 b:16.1 occ:0.33 ND2 C:ASN133 3.3 23.6 1.0 CB C:ASN133 3.7 16.0 1.0 CA C:ALA130 3.8 17.1 1.0 CG C:ASN133 4.0 19.1 1.0 O C:ALA130 4.1 14.2 1.0 CB C:ALA130 4.3 19.2 1.0 C C:ALA130 4.5 16.1 1.0 O C:LYS129 4.6 16.8 1.0 N C:ALA130 4.7 15.9 1.0 C C:LYS129 5.0 18.3 1.0

K.A.Baker, R.E.Dutch, R.A.Lamb, T.S.Jardetzky. Structural Basis For Paramyxovirus-Mediated Membrane Fusion. Mol.Cell V. 3 309 1999.
ISSN: ISSN 1097-2765
PubMed: 10198633
DOI: 10.1016/S1097-2765(00)80458-X