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Chlorine in PDB 1sw4: Crystal Structure of Prox From Archeoglobus Fulgidus in Complex with Trimethyl Ammonium

Protein crystallography data

The structure of Crystal Structure of Prox From Archeoglobus Fulgidus in Complex with Trimethyl Ammonium, PDB code: 1sw4 was solved by A.Schiefner, G.Holtmann, K.Diederichs, W.Welte, E.Bremer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.90
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 63.730, 75.740, 66.980, 90.00, 91.42, 90.00
R / Rfree (%) 21.6 / 24.5

Other elements in 1sw4:

The structure of Crystal Structure of Prox From Archeoglobus Fulgidus in Complex with Trimethyl Ammonium also contains other interesting chemical elements:

Zinc (Zn) 7 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Prox From Archeoglobus Fulgidus in Complex with Trimethyl Ammonium (pdb code 1sw4). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Prox From Archeoglobus Fulgidus in Complex with Trimethyl Ammonium, PDB code: 1sw4:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1sw4

Go back to Chlorine Binding Sites List in 1sw4
Chlorine binding site 1 out of 2 in the Crystal Structure of Prox From Archeoglobus Fulgidus in Complex with Trimethyl Ammonium


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Prox From Archeoglobus Fulgidus in Complex with Trimethyl Ammonium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl407

b:23.8
occ:1.00
NZ A:LYS13 3.0 24.0 1.0
OG1 A:THR66 3.1 17.9 1.0
NH1 A:ARG149 3.2 21.4 1.0
C1 A:TMA301 3.4 23.8 1.0
CG2 A:THR66 3.7 19.2 1.0
N1 A:TMA301 3.8 23.8 1.0
CD2 A:TYR63 3.8 19.9 1.0
CB A:THR66 3.9 19.5 1.0
C2 A:TMA301 3.9 23.4 1.0
OG1 A:THR45 4.0 22.8 1.0
NH2 A:ARG149 4.1 24.9 1.0
CE A:LYS13 4.1 23.6 1.0
CZ A:ARG149 4.1 23.7 1.0
OE1 A:GLU62 4.2 19.8 1.0
CE2 A:TYR63 4.2 20.5 1.0
CD A:LYS13 4.3 24.6 1.0
OE2 A:GLU145 4.5 25.9 1.0
CG A:TYR63 4.6 17.7 1.0
OH A:TYR111 4.6 21.4 1.0
CE2 A:TYR111 4.8 19.8 1.0
CB A:TYR63 4.9 18.9 1.0

Chlorine binding site 2 out of 2 in 1sw4

Go back to Chlorine Binding Sites List in 1sw4
Chlorine binding site 2 out of 2 in the Crystal Structure of Prox From Archeoglobus Fulgidus in Complex with Trimethyl Ammonium


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Prox From Archeoglobus Fulgidus in Complex with Trimethyl Ammonium within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl408

b:22.5
occ:1.00
NZ B:LYS13 2.9 23.7 1.0
OG1 B:THR66 3.2 18.7 1.0
NH1 B:ARG149 3.3 21.0 1.0
CD2 B:TYR63 3.7 16.4 1.0
C1 B:TMA302 3.7 23.1 1.0
N1 B:TMA302 3.8 23.4 1.0
CG2 B:THR66 3.8 18.0 1.0
C2 B:TMA302 3.8 23.2 1.0
CE B:LYS13 3.9 23.3 1.0
CD B:LYS13 4.0 24.2 1.0
OG1 B:THR45 4.0 23.1 1.0
CB B:THR66 4.0 17.7 1.0
OE1 B:GLU62 4.1 22.3 1.0
CE2 B:TYR63 4.1 18.4 1.0
CZ B:ARG149 4.2 20.2 1.0
NH2 B:ARG149 4.2 21.6 1.0
CG B:TYR63 4.6 17.0 1.0
OH B:TYR111 4.6 18.9 1.0
OE2 B:GLU145 4.7 24.4 1.0
CE2 B:TYR111 4.8 19.0 1.0
CB B:TYR63 4.8 17.1 1.0

Reference:

A.Schiefner, G.Holtmann, K.Diederichs, W.Welte, E.Bremer. Structural Basis For the Binding of Compatible Solutes By Prox From the Hyperthermophilic Archaeon Archaeoglobus Fulgidus. J.Biol.Chem. V. 279 48270 2004.
ISSN: ISSN 0021-9258
PubMed: 15308642
DOI: 10.1074/JBC.M403540200
Page generated: Sat Dec 12 08:49:19 2020

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