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Chlorine in PDB 1t1s: Crystal Structure of the Reductoisomerase Complexed with A Bisphosphonate

Enzymatic activity of Crystal Structure of the Reductoisomerase Complexed with A Bisphosphonate

All present enzymatic activity of Crystal Structure of the Reductoisomerase Complexed with A Bisphosphonate:
1.1.1.267;

Protein crystallography data

The structure of Crystal Structure of the Reductoisomerase Complexed with A Bisphosphonate, PDB code: 1t1s was solved by S.Yajima, K.Hara, J.M.Sanders, F.Yin, K.Ohsawa, J.Wiesner, H.Jomaa, E.Oldfield, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.40
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 182.917, 59.246, 86.988, 90.00, 90.00, 90.00
R / Rfree (%) 21.3 / 26

Other elements in 1t1s:

The structure of Crystal Structure of the Reductoisomerase Complexed with A Bisphosphonate also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Reductoisomerase Complexed with A Bisphosphonate (pdb code 1t1s). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of the Reductoisomerase Complexed with A Bisphosphonate, PDB code: 1t1s:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1t1s

Go back to Chlorine Binding Sites List in 1t1s
Chlorine binding site 1 out of 2 in the Crystal Structure of the Reductoisomerase Complexed with A Bisphosphonate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Reductoisomerase Complexed with A Bisphosphonate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl2001

b:33.5
occ:0.50
CL1 A:CBQ2001 0.0 33.5 0.5
C4 A:CBQ2001 1.7 34.5 0.5
C3 A:CBQ2001 2.7 33.8 0.5
C5 A:CBQ2001 2.7 33.8 0.5
CE1 A:HIS256 3.3 29.9 1.0
CA A:PRO273 3.3 41.7 1.0
CB A:PRO273 3.5 41.6 1.0
ND1 A:HIS256 3.8 31.0 1.0
CH2 A:TRP211 3.9 69.3 1.0
N2 A:CBQ2001 4.0 33.2 0.5
CZ3 A:TRP211 4.0 68.9 1.0
C6 A:CBQ2001 4.0 33.3 0.5
NE2 A:HIS256 4.1 30.0 1.0
O A:SER253 4.2 30.4 1.0
OG A:SER150 4.2 38.8 1.0
N A:PRO273 4.3 41.0 1.0
CZ2 A:TRP211 4.3 69.2 1.0
C A:PRO273 4.3 42.6 1.0
CE3 A:TRP211 4.4 68.7 1.0
C2 A:CBQ2001 4.5 33.9 0.5
O A:GLU272 4.5 40.8 1.0
CE2 A:TRP211 4.7 69.5 1.0
CD2 A:TRP211 4.7 68.7 1.0
C A:GLU272 4.8 40.2 1.0
CG A:HIS256 4.8 30.9 1.0
CB A:SER253 4.8 27.1 1.0
CG A:PRO273 4.9 40.7 1.0
CD2 A:HIS256 4.9 31.2 1.0
O A:PRO273 4.9 46.9 1.0
CB A:SER150 5.0 33.6 1.0
N A:ASP274 5.0 40.9 1.0

Chlorine binding site 2 out of 2 in 1t1s

Go back to Chlorine Binding Sites List in 1t1s
Chlorine binding site 2 out of 2 in the Crystal Structure of the Reductoisomerase Complexed with A Bisphosphonate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Reductoisomerase Complexed with A Bisphosphonate within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl3001

b:36.8
occ:0.50
CL1 B:CBQ3001 0.0 36.8 0.5
C4 B:CBQ3001 1.7 39.4 0.5
C3 B:CBQ3001 2.7 39.5 0.5
C5 B:CBQ3001 2.7 37.8 0.5
O B:HOH3015 3.2 37.9 1.0
CE1 B:HIS256 3.3 32.8 1.0
CA B:PRO273 3.3 39.7 1.0
CB B:PRO273 3.4 38.3 1.0
ND1 B:HIS256 3.8 35.3 1.0
CZ3 B:TRP211 4.0 69.9 1.0
N2 B:CBQ3001 4.0 39.5 0.5
C6 B:CBQ3001 4.0 37.7 0.5
CH2 B:TRP211 4.0 70.3 1.0
NE2 B:HIS256 4.1 37.9 1.0
O B:SER253 4.1 32.1 1.0
N B:PRO273 4.2 39.6 1.0
OG B:SER150 4.2 40.2 1.0
O B:GLU272 4.2 38.4 1.0
C B:PRO273 4.3 40.4 1.0
CE3 B:TRP211 4.3 69.7 1.0
CZ2 B:TRP211 4.5 70.7 1.0
C2 B:CBQ3001 4.5 39.0 0.5
C B:GLU272 4.5 37.1 1.0
O B:PRO273 4.6 45.9 1.0
CG B:HIS256 4.7 33.0 1.0
CD2 B:TRP211 4.7 69.8 1.0
CB B:SER253 4.7 33.0 1.0
CG B:PRO273 4.8 38.2 1.0
CE2 B:TRP211 4.8 70.3 1.0
CD B:PRO273 4.8 38.4 1.0
CD2 B:HIS256 4.9 34.7 1.0
CB B:SER150 5.0 33.2 1.0

Reference:

S.Yajima, K.Hara, J.M.Sanders, F.Yin, K.Ohsawa, J.Wiesner, H.Jomaa, E.Oldfield. Crystallographic Structures of Two Bisphosphonate:1-Deoxyxylulose-5-Phosphate Reductoisomerase Complexes J.Am.Chem.Soc. V. 126 10824 2004.
ISSN: ISSN 0002-7863
PubMed: 15339150
DOI: 10.1021/JA040126M
Page generated: Sat Jul 20 02:20:18 2024

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