Chlorine in PDB 1t6v: Crystal Structure Analysis of the Nurse Shark New Antigen Receptor (Nar) Variable Domain in Complex with Lysozyme

All present enzymatic activity of Crystal Structure Analysis of the Nurse Shark New Antigen Receptor (Nar) Variable Domain in Complex with Lysozyme:
3.2.1.17;

The structure of Crystal Structure Analysis of the Nurse Shark New Antigen Receptor (Nar) Variable Domain in Complex with Lysozyme, PDB code: 1t6v was solved by R.L.Stanfield, H.Dooley, M.F.Flajnik, I.A.Wilson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.10 / 1.70
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	75.790, 113.810, 58.440, 90.00, 90.00, 90.00
R / Rfree (%)	19.4 / 22.1

The binding sites of Chlorine atom in the Crystal Structure Analysis of the Nurse Shark New Antigen Receptor (Nar) Variable Domain in Complex with Lysozyme (pdb code 1t6v). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure Analysis of the Nurse Shark New Antigen Receptor (Nar) Variable Domain in Complex with Lysozyme, PDB code: 1t6v:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Crystal Structure Analysis of the Nurse Shark New Antigen Receptor (Nar) Variable Domain in Complex with Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure Analysis of the Nurse Shark New Antigen Receptor (Nar) Variable Domain in Complex with Lysozyme within 5.0Å range: probe atom residue distance (Å) B Occ N:Cl114 b:6.9 occ:1.00 NZ N:LYS12 3.2 6.3 1.0 N N:THR19 3.2 7.2 1.0 O N:HOH125 3.3 10.7 1.0 CE N:LYS12 3.6 7.0 1.0 CA N:LEU18 3.8 7.4 1.0 CD1 N:LEU18 3.9 12.2 1.0 O N:THR19 3.9 5.5 1.0 C N:LEU18 4.0 6.3 1.0 O N:SER17 4.1 6.4 1.0 CA N:THR19 4.2 5.9 1.0 CB N:THR19 4.2 7.7 1.0 C N:THR19 4.5 5.9 1.0 OG1 N:THR19 4.6 6.5 1.0 CB N:LEU18 4.7 6.9 1.0 N N:LEU18 4.7 7.4 1.0 C N:SER17 4.7 7.3 1.0 CG N:LEU18 4.8 10.9 1.0

Chlorine binding site 2 out of 2 in the Crystal Structure Analysis of the Nurse Shark New Antigen Receptor (Nar) Variable Domain in Complex with Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure Analysis of the Nurse Shark New Antigen Receptor (Nar) Variable Domain in Complex with Lysozyme within 5.0Å range: probe atom residue distance (Å) B Occ O:Cl114 b:8.9 occ:1.00 O O:HOH169 3.0 19.4 1.0 NZ O:LYS12 3.1 11.7 1.0 O O:HOH141 3.3 14.6 1.0 CE O:LYS12 3.4 17.4 1.0 N O:THR19 3.4 6.9 1.0 CA O:LEU18 3.6 8.5 1.0 C O:LEU18 4.1 7.1 1.0 O O:SER17 4.1 11.3 1.0 CB O:LEU18 4.2 10.4 1.0 O O:THR19 4.2 6.2 1.0 CD1 O:LEU18 4.2 19.2 1.0 CG O:LEU18 4.3 19.1 1.0 CA O:THR19 4.4 6.1 1.0 CB O:THR19 4.6 6.3 1.0 N O:LEU18 4.7 7.3 1.0 CD O:LYS12 4.8 16.8 1.0 C O:THR19 4.8 6.0 1.0 C O:SER17 4.8 9.8 1.0 OG1 O:THR19 4.9 8.1 1.0

R.L.Stanfield, H.Dooley, M.F.Flajnik, I.A.Wilson. Crystal Structure of A Shark Single-Domain Antibody V Region in Complex with Lysozyme. Science V. 305 1770 2004.
ISSN: ISSN 0036-8075
PubMed: 15319492
DOI: 10.1126/SCIENCE.1101148