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Chlorine in PDB 1t9k: X-Ray Crystal Structure of Aif-2B Alpha Subunit-Related Translation Initiation Factor [Thermotoga Maritima]

Enzymatic activity of X-Ray Crystal Structure of Aif-2B Alpha Subunit-Related Translation Initiation Factor [Thermotoga Maritima]

All present enzymatic activity of X-Ray Crystal Structure of Aif-2B Alpha Subunit-Related Translation Initiation Factor [Thermotoga Maritima]:
5.3.1.23;

Protein crystallography data

The structure of X-Ray Crystal Structure of Aif-2B Alpha Subunit-Related Translation Initiation Factor [Thermotoga Maritima], PDB code: 1t9k was solved by J.Osipiuk, T.Skarina, A.Savchenko, A.Edwards, M.Cymborowski, W.Minor, A.Joachimiak, Midwest Center For Structural Genomics(Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.33 / 2.60
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 103.885, 103.885, 259.929, 90.00, 90.00, 120.00
R / Rfree (%) 23.9 / 29.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the X-Ray Crystal Structure of Aif-2B Alpha Subunit-Related Translation Initiation Factor [Thermotoga Maritima] (pdb code 1t9k). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the X-Ray Crystal Structure of Aif-2B Alpha Subunit-Related Translation Initiation Factor [Thermotoga Maritima], PDB code: 1t9k:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1t9k

Go back to Chlorine Binding Sites List in 1t9k
Chlorine binding site 1 out of 2 in the X-Ray Crystal Structure of Aif-2B Alpha Subunit-Related Translation Initiation Factor [Thermotoga Maritima]


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of X-Ray Crystal Structure of Aif-2B Alpha Subunit-Related Translation Initiation Factor [Thermotoga Maritima] within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl416

b:33.2
occ:1.00
NZ B:LYS256 3.4 36.4 1.0
NH1 A:ARG257 3.4 24.4 1.0
NH2 A:ARG257 3.5 22.7 1.0
OG1 B:THR317 3.9 22.1 1.0
CZ A:ARG257 3.9 23.6 1.0
CE B:LYS256 4.0 34.8 1.0
CB B:THR317 4.1 22.9 1.0
O B:THR317 4.2 26.2 1.0
CD B:LYS256 4.6 34.6 1.0
CD2 B:LEU318 4.6 23.5 1.0
C B:THR317 4.7 23.2 1.0
O B:HOH450 5.0 29.0 1.0

Chlorine binding site 2 out of 2 in 1t9k

Go back to Chlorine Binding Sites List in 1t9k
Chlorine binding site 2 out of 2 in the X-Ray Crystal Structure of Aif-2B Alpha Subunit-Related Translation Initiation Factor [Thermotoga Maritima]


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of X-Ray Crystal Structure of Aif-2B Alpha Subunit-Related Translation Initiation Factor [Thermotoga Maritima] within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl406

b:33.7
occ:1.00
NZ A:LYS256 3.2 38.7 1.0
NH1 B:ARG257 3.3 26.6 1.0
NH2 B:ARG257 3.5 25.9 1.0
CE A:LYS256 3.8 36.8 1.0
CZ B:ARG257 3.8 25.2 1.0
OG1 A:THR317 4.0 22.2 1.0
CD2 A:LEU318 4.3 24.1 1.0
CB A:THR317 4.3 22.1 1.0
O A:THR317 4.4 24.1 1.0
CD A:LYS256 4.5 36.1 1.0
C A:THR317 4.9 21.9 1.0

Reference:

J.Osipiuk, T.Skarina, A.Savchenko, A.Edwards, M.Cymborowski, W.Minor, A.Joachimiak. X-Ray Crystal Structure of Aif-2B Translation Initiation Factor From Thermotoga Maritima To Be Published.
Page generated: Sat Dec 12 08:49:49 2020

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