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Chlorine in PDB 1u16: Crystal Structure of A Duck-Delta-Crystallin-1 Double Loop Mutant (Dlm) in Complex with Sulfate

Enzymatic activity of Crystal Structure of A Duck-Delta-Crystallin-1 Double Loop Mutant (Dlm) in Complex with Sulfate

All present enzymatic activity of Crystal Structure of A Duck-Delta-Crystallin-1 Double Loop Mutant (Dlm) in Complex with Sulfate:
4.3.2.1;

Protein crystallography data

The structure of Crystal Structure of A Duck-Delta-Crystallin-1 Double Loop Mutant (Dlm) in Complex with Sulfate, PDB code: 1u16 was solved by M.Tsai, L.M.Sampaleanu, C.Greene, L.Creagh, C.Haynes, P.L.Howell, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 58.16 / 2.20
Space group P 4 21 2
Cell size a, b, c (Å), α, β, γ (°) 133.280, 133.280, 73.910, 90.00, 90.00, 90.00
R / Rfree (%) 21.2 / 26.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Duck-Delta-Crystallin-1 Double Loop Mutant (Dlm) in Complex with Sulfate (pdb code 1u16). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of A Duck-Delta-Crystallin-1 Double Loop Mutant (Dlm) in Complex with Sulfate, PDB code: 1u16:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 1u16

Go back to Chlorine Binding Sites List in 1u16
Chlorine binding site 1 out of 3 in the Crystal Structure of A Duck-Delta-Crystallin-1 Double Loop Mutant (Dlm) in Complex with Sulfate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Duck-Delta-Crystallin-1 Double Loop Mutant (Dlm) in Complex with Sulfate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1002

b:56.7
occ:1.00
NZ A:LYS414 3.3 44.7 1.0
OG A:SER421 3.4 58.5 1.0
CB A:SER421 4.1 40.6 1.0
CA A:SER421 4.5 45.0 1.0
CE A:LYS414 4.6 42.3 1.0
O A:PHE420 5.0 39.0 1.0

Chlorine binding site 2 out of 3 in 1u16

Go back to Chlorine Binding Sites List in 1u16
Chlorine binding site 2 out of 3 in the Crystal Structure of A Duck-Delta-Crystallin-1 Double Loop Mutant (Dlm) in Complex with Sulfate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Duck-Delta-Crystallin-1 Double Loop Mutant (Dlm) in Complex with Sulfate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1003

b:62.3
occ:1.00
N A:LYS57 4.1 47.5 1.0
CG A:LYS57 4.3 57.0 1.0
CA A:THR56 4.4 48.8 1.0
CB A:THR56 4.4 48.8 1.0
CD A:LYS57 4.6 59.4 1.0
CE A:LYS57 4.8 59.9 1.0
CB A:LYS57 4.8 52.0 1.0
C A:THR56 4.8 49.5 1.0
CG2 A:THR56 4.8 47.2 1.0

Chlorine binding site 3 out of 3 in 1u16

Go back to Chlorine Binding Sites List in 1u16
Chlorine binding site 3 out of 3 in the Crystal Structure of A Duck-Delta-Crystallin-1 Double Loop Mutant (Dlm) in Complex with Sulfate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of A Duck-Delta-Crystallin-1 Double Loop Mutant (Dlm) in Complex with Sulfate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1004

b:58.8
occ:1.00
N A:LYS357 3.4 37.8 1.0
N A:GLU358 3.7 42.3 1.0
CB A:LYS357 4.0 39.4 1.0
C A:SER356 4.1 35.4 1.0
CA A:SER356 4.1 32.0 1.0
CA A:LYS357 4.1 41.7 1.0
CB A:GLU358 4.4 47.2 1.0
C A:LYS357 4.4 43.1 1.0
OG A:SER356 4.5 38.2 1.0
CG A:LYS357 4.6 48.9 1.0
O A:ILE355 4.6 35.8 1.0
CA A:GLU358 4.7 42.5 1.0
CB A:SER356 4.9 34.5 1.0
CD A:LYS357 4.9 60.4 1.0

Reference:

M.Tsai, L.M.Sampaleanu, C.Greene, L.Creagh, C.Haynes, P.L.Howell. A Duck DELTA1 Crystallin Double Loop Mutant Provides Insight Into Residues Important For Argininosuccinate Lyase Activity. Biochemistry V. 43 11672 2004.
ISSN: ISSN 0006-2960
PubMed: 15362851
DOI: 10.1021/BI0489006
Page generated: Sat Dec 12 08:50:29 2020

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