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Chlorine in PDB 1ur5: Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface

Enzymatic activity of Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface

All present enzymatic activity of Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface:
1.1.1.37;

Protein crystallography data

The structure of Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface, PDB code: 1ur5 was solved by A.Bjork, B.Dalhus, D.Mantzilas, V.G.H.Eijsink, R.Sirevag, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.00 / 1.75
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 105.575, 105.575, 102.531, 90.00, 90.00, 120.00
R / Rfree (%) 19 / 22.3

Other elements in 1ur5:

The structure of Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface also contains other interesting chemical elements:

Cadmium (Cd) 6 atoms
Sodium (Na) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface (pdb code 1ur5). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface, PDB code: 1ur5:

Chlorine binding site 1 out of 1 in 1ur5

Go back to Chlorine Binding Sites List in 1ur5
Chlorine binding site 1 out of 1 in the Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1312

b:25.9
occ:1.00
CD A:CD1309 2.7 27.7 0.5
N A:ALA124 3.4 19.1 1.0
O A:HOH2272 3.5 26.1 1.0
CB A:ASP123 3.6 18.4 1.0
CB A:ALA124 3.8 20.0 1.0
CG2 A:THR302 3.8 23.8 1.0
CB A:PRO121 3.8 24.2 1.0
N A:ASP123 3.9 17.1 1.0
O A:HOH2156 4.0 20.3 1.0
CB A:THR302 4.0 25.4 1.0
CA A:ASP123 4.0 19.2 1.0
C A:ASP123 4.1 17.9 1.0
CA A:ALA124 4.2 19.6 1.0
OE1 A:GLU178 4.2 28.8 1.0
OG1 A:THR302 4.2 26.9 1.0
O A:HOH2157 4.3 25.5 1.0
CG1 A:VAL299 4.3 18.7 1.0
C A:PRO121 4.4 20.9 1.0
O A:PRO121 4.4 19.1 1.0
OE2 A:GLU178 4.4 30.8 1.0
OD2 A:ASP123 4.5 20.3 1.0
CG A:ASP123 4.5 21.8 1.0
CA A:PRO121 4.6 23.0 1.0
CG A:PRO121 4.7 25.8 1.0
CA A:VAL299 4.7 20.3 1.0
N A:LEU122 4.8 19.8 1.0
CD A:GLU178 4.8 26.1 1.0
CG2 A:VAL299 4.8 21.0 1.0
C A:LEU122 4.8 17.3 1.0
O A:VAL299 4.8 21.2 1.0
CB A:VAL299 4.9 19.6 1.0

Reference:

A.Bjork, B.Dalhus, D.Mantzilas, V.G.H.Eijsink, R.Sirevag. Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer-Dimer Interface J.Mol.Biol. V. 334 811 2003.
ISSN: ISSN 0022-2836
PubMed: 14636605
DOI: 10.1016/J.JMB.2003.10.006
Page generated: Sat Dec 12 08:50:59 2020

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