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Chlorine in PDB 1v8c: Crystal Structure of Moad Related Protein From Thermus Thermophilus HB8

Protein crystallography data

The structure of Crystal Structure of Moad Related Protein From Thermus Thermophilus HB8, PDB code: 1v8c was solved by H.Mizutani, N.Kunishima, Riken Structural Genomics/Proteomicsinitiative (Rsgi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 80.179, 83.553, 93.066, 90.00, 90.00, 90.00
R / Rfree (%) 22.1 / 24.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Moad Related Protein From Thermus Thermophilus HB8 (pdb code 1v8c). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Moad Related Protein From Thermus Thermophilus HB8, PDB code: 1v8c:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1v8c

Go back to Chlorine Binding Sites List in 1v8c
Chlorine binding site 1 out of 2 in the Crystal Structure of Moad Related Protein From Thermus Thermophilus HB8


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Moad Related Protein From Thermus Thermophilus HB8 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1002

b:12.3
occ:1.00
O A:HOH1038 2.9 22.8 1.0
O C:HOH172 3.1 14.5 1.0
N A:LEU68 3.2 10.0 1.0
NH1 C:ARG158 3.2 10.0 1.0
CA A:GLY67 3.6 9.7 1.0
CA C:TRP108 3.7 10.8 1.0
CG A:LEU68 3.8 14.4 1.0
C A:GLY67 3.9 8.9 1.0
CD1 C:TRP108 3.9 10.2 1.0
CB A:LEU68 4.0 10.8 1.0
CB C:TRP108 4.0 11.9 1.0
O C:TRP108 4.2 14.4 1.0
CA A:LEU68 4.2 9.6 1.0
CG C:TRP108 4.2 10.5 1.0
CZ C:ARG158 4.2 9.2 1.0
CD1 A:LEU68 4.2 18.6 1.0
C C:TRP108 4.3 11.8 1.0
NH2 C:ARG158 4.4 9.5 1.0
O C:GLU107 4.4 11.6 1.0
N C:TRP108 4.7 11.3 1.0
N A:GLY67 4.7 9.0 1.0
O A:GLN66 4.8 10.5 1.0
O C:HOH223 4.8 26.8 1.0
NE1 C:TRP108 4.9 10.9 1.0
C C:GLU107 4.9 12.5 1.0

Chlorine binding site 2 out of 2 in 1v8c

Go back to Chlorine Binding Sites List in 1v8c
Chlorine binding site 2 out of 2 in the Crystal Structure of Moad Related Protein From Thermus Thermophilus HB8


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Moad Related Protein From Thermus Thermophilus HB8 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl1003

b:22.3
occ:1.00
O D:HOH221 2.8 30.5 1.0
O B:HOH1004 3.1 20.2 1.0
N D:LEU68 3.2 16.9 1.0
NH1 B:ARG158 3.3 16.5 1.0
CA D:GLY67 3.5 15.7 1.0
CA B:TRP108 3.8 23.5 1.0
CG D:LEU68 3.8 19.2 1.0
CD1 B:TRP108 3.8 20.0 1.0
C D:GLY67 3.9 14.3 1.0
CB D:LEU68 4.1 17.8 1.0
CB B:TRP108 4.2 21.3 1.0
O B:GLU107 4.2 26.5 1.0
CA D:LEU68 4.2 15.6 1.0
CG B:TRP108 4.3 19.4 1.0
CZ B:ARG158 4.3 14.7 1.0
C B:TRP108 4.4 25.4 1.0
O B:TRP108 4.4 25.2 1.0
CD1 D:LEU68 4.4 19.2 1.0
NH2 B:ARG158 4.6 16.8 1.0
N D:GLY67 4.7 14.9 1.0
N B:TRP108 4.7 24.2 1.0
O D:GLN66 4.8 15.4 1.0
O D:HOH277 4.8 44.9 1.0
C B:GLU107 4.8 24.9 1.0
NE1 B:TRP108 4.9 17.3 1.0
CD2 D:LEU68 4.9 21.2 1.0
CD1 D:LEU49 4.9 28.2 1.0

Reference:

H.Mizutani, N.Kunishima. Crystal Structure of Moad Related Protein From Thermus Thermophilus HB8 To Be Published.
Page generated: Sat Dec 12 08:51:33 2020

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