Chlorine in PDB 1v8p: Crystal Structure of PAE2754 From Pyrobaculum Aerophilum

The structure of Crystal Structure of PAE2754 From Pyrobaculum Aerophilum, PDB code: 1v8p was solved by V.L.Arcus, K.Backbro, A.Roos, E.L.Daniel, E.N.Baker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	49.63 / 2.52
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	60.560, 165.190, 203.350, 90.00, 90.00, 90.00
R / Rfree (%)	25 / 30.5

The binding sites of Chlorine atom in the Crystal Structure of PAE2754 From Pyrobaculum Aerophilum (pdb code 1v8p). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 6 binding sites of Chlorine where determined in the Crystal Structure of PAE2754 From Pyrobaculum Aerophilum, PDB code: 1v8p:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6;

Chlorine binding site 1 out of 6 in the Crystal Structure of PAE2754 From Pyrobaculum Aerophilum


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of PAE2754 From Pyrobaculum Aerophilum within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl1002 b:62.3 occ:1.00 NH2 A:ARG48 3.2 51.8 1.0 O C:HOH141 3.4 35.2 1.0 O B:GLY87 4.2 37.7 1.0 O C:GLY87 4.3 34.6 1.0 CZ A:ARG48 4.5 48.6 1.0 NH2 D:ARG48 4.6 50.9 1.0 CG2 C:THR89 4.7 30.9 1.0 O B:HOH138 4.8 29.4 1.0 N C:THR89 5.0 34.0 1.0 O C:HOH147 5.0 38.1 1.0

Chlorine binding site 2 out of 6 in the Crystal Structure of PAE2754 From Pyrobaculum Aerophilum


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of PAE2754 From Pyrobaculum Aerophilum within 5.0Å range: probe atom residue distance (Å) B Occ D:Cl1004 b:64.9 occ:1.00 O D:GLY87 3.5 44.0 1.0 NH2 C:ARG48 3.6 45.1 1.0 O A:GLY87 4.2 42.5 1.0 NH2 B:ARG48 4.5 50.8 1.0 CG2 D:THR89 4.6 37.6 1.0 C D:GLY87 4.6 42.8 1.0 CZ C:ARG48 4.9 45.6 1.0 CA D:LEU88 4.9 41.0 1.0 N D:THR89 4.9 38.0 1.0 CG2 A:THR89 4.9 36.2 1.0 C D:LEU88 5.0 40.0 1.0

Chlorine binding site 3 out of 6 in the Crystal Structure of PAE2754 From Pyrobaculum Aerophilum


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of PAE2754 From Pyrobaculum Aerophilum within 5.0Å range: probe atom residue distance (Å) B Occ E:Cl1001 b:70.5 occ:1.00 NH2 G:ARG48 3.7 51.8 1.0 O E:GLY87 3.8 43.5 1.0 O H:GLY87 3.9 41.2 1.0 NH2 F:ARG48 3.9 42.6 1.0 O E:HOH1006 4.3 39.1 1.0 CG2 E:THR89 4.6 34.4 1.0 CG2 H:THR89 4.7 34.2 1.0 C H:GLY87 4.9 40.2 1.0 C E:GLY87 4.9 42.9 1.0 CZ G:ARG48 5.0 50.2 1.0

Chlorine binding site 4 out of 6 in the Crystal Structure of PAE2754 From Pyrobaculum Aerophilum


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of PAE2754 From Pyrobaculum Aerophilum within 5.0Å range: probe atom residue distance (Å) B Occ H:Cl1005 b:60.3 occ:1.00 NH2 H:ARG48 3.4 50.2 1.0 O G:GLY87 4.2 37.7 1.0 O F:GLY87 4.4 37.2 1.0 CG2 F:THR89 4.5 30.2 1.0 CZ H:ARG48 4.6 49.7 1.0 NH2 E:ARG48 4.7 49.8 1.0 CG2 G:THR89 4.8 31.9 1.0

Chlorine binding site 5 out of 6 in the Crystal Structure of PAE2754 From Pyrobaculum Aerophilum


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of PAE2754 From Pyrobaculum Aerophilum within 5.0Å range: probe atom residue distance (Å) B Occ K:Cl1003 b:59.0 occ:1.00 NH2 K:ARG48 3.4 66.9 1.0 O L:GLY87 3.9 44.9 1.0 O I:GLY87 4.4 40.9 1.0 CZ K:ARG48 4.5 65.8 1.0 NH2 J:ARG48 4.5 50.9 1.0 CG2 L:THR89 4.5 35.9 1.0 NH1 K:ARG48 4.7 65.8 1.0 C L:GLY87 4.7 45.4 1.0 N L:THR89 4.9 41.1 1.0

Chlorine binding site 6 out of 6 in the Crystal Structure of PAE2754 From Pyrobaculum Aerophilum


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of PAE2754 From Pyrobaculum Aerophilum within 5.0Å range: probe atom residue distance (Å) B Occ K:Cl1006 b:79.1 occ:1.00 NH2 L:ARG48 3.0 51.8 1.0 O K:GLY87 3.4 57.2 1.0 OE2 J:GLU112 4.2 56.5 1.0 CZ L:ARG48 4.3 50.7 1.0 O J:GLY87 4.3 44.2 1.0 C K:GLY87 4.5 56.9 1.0 CG2 K:THR89 4.5 51.2 1.0 CA K:LEU88 4.7 53.9 1.0 NH2 I:ARG48 4.8 53.6 1.0 C K:LEU88 4.8 52.9 1.0 N K:THR89 5.0 50.9 1.0

V.L.Arcus, K.Backbro, A.Roos, E.L.Daniel, E.N.Baker. Distant Structural Homology Leads to the Functional Characterization of An Archaeal Pin Domain As An Exonuclease J.Biol.Chem. V. 279 16471 2004.
ISSN: ISSN 0021-9258
PubMed: 14734548
DOI: 10.1074/JBC.M313833200