Atomistry » Chlorine » PDB 1v8f-1vq0 » 1vjl
Atomistry »
  Chlorine »
    PDB 1v8f-1vq0 »
      1vjl »

Chlorine in PDB 1vjl: Crystal Structure of A DUF151 Family Protein (TM0160) From Thermotoga Maritima at 1.90 A Resolution

Protein crystallography data

The structure of Crystal Structure of A DUF151 Family Protein (TM0160) From Thermotoga Maritima at 1.90 A Resolution, PDB code: 1vjl was solved by Joint Center For Structural Genomics, Joint Center For Structuralgenomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.96 / 1.90
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 43.509, 51.061, 72.974, 90.00, 97.39, 90.00
R / Rfree (%) 19.8 / 25.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A DUF151 Family Protein (TM0160) From Thermotoga Maritima at 1.90 A Resolution (pdb code 1vjl). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of A DUF151 Family Protein (TM0160) From Thermotoga Maritima at 1.90 A Resolution, PDB code: 1vjl:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1vjl

Go back to Chlorine Binding Sites List in 1vjl
Chlorine binding site 1 out of 2 in the Crystal Structure of A DUF151 Family Protein (TM0160) From Thermotoga Maritima at 1.90 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A DUF151 Family Protein (TM0160) From Thermotoga Maritima at 1.90 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:56.6
occ:1.00
OG A:SER114 2.9 45.7 1.0
CB A:SER114 3.3 44.8 1.0
O A:HOH409 3.3 44.3 1.0
O A:HOH402 3.4 37.0 1.0
N A:SER114 3.4 42.9 1.0
CB A:ARG112 3.6 42.9 1.0
CD A:PRO113 3.7 44.3 1.0
CA A:SER114 4.0 44.3 1.0
N A:PRO113 4.0 43.2 1.0
CG2 A:ILE35 4.0 45.5 1.0
CD A:ARG112 4.1 41.4 1.0
CG A:ARG112 4.2 41.5 1.0
C A:ARG112 4.5 43.2 1.0
CG A:PRO113 4.5 43.8 1.0
CB A:PRO113 4.5 43.2 1.0
C A:PRO113 4.5 44.1 1.0
CA A:ARG112 4.5 42.3 1.0
O A:HOH431 4.5 44.7 1.0
NH1 A:ARG112 4.5 41.9 1.0
CA A:PRO113 4.6 44.0 1.0
NE A:ARG112 4.6 38.0 1.0
CB A:ILE35 4.6 43.7 1.0
CZ A:ARG112 4.8 40.0 1.0
O A:TRP34 4.8 46.5 1.0
CA A:ILE35 4.9 44.3 1.0

Chlorine binding site 2 out of 2 in 1vjl

Go back to Chlorine Binding Sites List in 1vjl
Chlorine binding site 2 out of 2 in the Crystal Structure of A DUF151 Family Protein (TM0160) From Thermotoga Maritima at 1.90 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A DUF151 Family Protein (TM0160) From Thermotoga Maritima at 1.90 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl302

b:53.0
occ:1.00
OG B:SER114 2.8 40.9 1.0
CB B:SER114 3.2 42.5 1.0
O B:HOH415 3.2 35.0 1.0
N B:SER114 3.3 41.9 1.0
CB B:ARG112 3.5 39.3 1.0
CD B:PRO113 3.5 40.1 1.0
O B:HOH424 3.6 42.2 1.0
CG B:PRO113 3.6 41.9 1.0
CA B:SER114 3.8 42.1 1.0
N B:PRO113 4.0 40.4 1.0
CD B:ARG112 4.0 39.6 1.0
CG2 B:ILE35 4.2 40.6 1.0
CG B:ARG112 4.2 39.0 1.0
NH1 B:ARG112 4.3 45.6 1.0
C B:PRO113 4.3 41.8 1.0
C B:ARG112 4.4 39.9 1.0
NE B:ARG112 4.5 40.6 1.0
CA B:ARG112 4.5 39.1 1.0
CA B:PRO113 4.6 41.2 1.0
O B:HOH417 4.6 50.4 1.0
CZ B:ARG112 4.6 41.4 1.0
CB B:PRO113 4.6 41.8 1.0
CB B:ILE35 4.6 41.1 1.0
O B:TRP34 4.9 39.9 1.0
CA B:ILE35 4.9 40.8 1.0

Reference:

G.Spraggon, D.Pantazatos, H.E.Klock, I.A.Wilson, V.L.Woods, S.A.Lesley. On the Use of Dxms to Produce More Crystallizable Proteins: Structures of the T. Maritima Proteins TM0160 and TM1171. Protein Sci. V. 13 3187 2004.
ISSN: ISSN 0961-8368
PubMed: 15557262
DOI: 10.1110/PS.04939904
Page generated: Sat Dec 12 08:51:50 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy