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Chlorine in PDB 1vme: Crystal Structure of Flavoprotein (TM0755) From Thermotoga Maritima at 1.80 A Resolution

Protein crystallography data

The structure of Crystal Structure of Flavoprotein (TM0755) From Thermotoga Maritima at 1.80 A Resolution, PDB code: 1vme was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.92 / 1.80
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 55.242, 95.831, 90.130, 90.00, 95.43, 90.00
R / Rfree (%) 14.7 / 18.1

Other elements in 1vme:

The structure of Crystal Structure of Flavoprotein (TM0755) From Thermotoga Maritima at 1.80 A Resolution also contains other interesting chemical elements:

Iron (Fe) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Flavoprotein (TM0755) From Thermotoga Maritima at 1.80 A Resolution (pdb code 1vme). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of Flavoprotein (TM0755) From Thermotoga Maritima at 1.80 A Resolution, PDB code: 1vme:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 1vme

Go back to Chlorine Binding Sites List in 1vme
Chlorine binding site 1 out of 3 in the Crystal Structure of Flavoprotein (TM0755) From Thermotoga Maritima at 1.80 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Flavoprotein (TM0755) From Thermotoga Maritima at 1.80 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl399

b:21.0
occ:1.00
NE A:ARG327 3.2 24.9 1.0
NE B:ARG327 3.3 26.1 1.0
NH2 A:ARG327 3.3 24.7 1.0
NH2 B:ARG327 3.3 24.5 1.0
CD1 B:PHE328 3.7 20.1 1.0
CZ A:ARG327 3.7 23.1 1.0
CA B:PHE328 3.7 22.0 1.0
CZ B:ARG327 3.8 25.2 1.0
CD1 A:PHE328 3.8 22.1 1.0
CA A:PHE328 3.8 21.2 1.0
CB B:PHE328 3.9 24.4 1.0
CD1 A:LEU331 3.9 20.0 1.0
CD1 B:LEU331 4.0 21.8 1.0
CB A:PHE328 4.0 22.4 1.0
N B:PHE328 4.2 23.1 1.0
N A:PHE328 4.2 19.2 1.0
CG B:PHE328 4.3 22.4 1.0
CD A:ARG327 4.3 23.4 1.0
CG A:PHE328 4.4 22.8 1.0
CD B:ARG327 4.4 26.4 1.0
CG A:ARG327 4.6 22.4 1.0
CG B:ARG327 4.6 25.9 1.0
C A:ARG327 4.7 23.0 1.0
CE1 B:PHE328 4.7 25.6 1.0
C B:ARG327 4.7 25.1 1.0
CE1 A:PHE328 4.8 26.7 1.0
O A:ARG327 4.9 21.0 1.0
O B:ARG327 5.0 22.2 1.0

Chlorine binding site 2 out of 3 in 1vme

Go back to Chlorine Binding Sites List in 1vme
Chlorine binding site 2 out of 3 in the Crystal Structure of Flavoprotein (TM0755) From Thermotoga Maritima at 1.80 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Flavoprotein (TM0755) From Thermotoga Maritima at 1.80 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl400

b:26.8
occ:1.00
OH A:TYR318 3.1 20.4 0.5
N A:TYR264 3.2 29.3 1.0
N A:PHE266 3.4 22.5 1.0
N A:VAL267 3.4 19.4 1.0
N A:GLY265 3.5 26.1 1.0
N A:MSE263 3.5 32.2 1.0
CG2 A:VAL267 3.7 20.4 1.0
CB A:PHE266 3.8 20.2 1.0
OG A:SER262 3.8 26.2 1.0
CA A:PHE266 3.9 22.2 1.0
CA A:TYR264 3.9 27.4 1.0
OG A:SER316 4.0 26.1 0.5
C A:TYR264 4.0 29.1 1.0
CZ A:TYR318 4.0 16.5 0.5
CE2 A:TYR318 4.1 19.3 0.5
CB A:TYR264 4.1 29.3 1.0
CA A:SER262 4.1 24.3 1.0
C A:SER262 4.2 26.8 1.0
C A:PHE266 4.2 19.9 1.0
C A:MSE263 4.2 35.3 1.0
CD2 A:TYR264 4.2 36.1 1.0
CB A:VAL267 4.2 17.6 1.0
CA A:MSE263 4.2 38.9 1.0
C A:GLY265 4.3 27.3 1.0
OG A:SER316 4.3 31.0 0.5
CD2 A:PHE266 4.3 26.8 1.0
CA A:VAL267 4.4 17.1 1.0
CB A:MSE263 4.4 38.2 1.0
CA A:GLY265 4.4 26.8 1.0
CG A:TYR264 4.5 27.5 1.0
CG A:PHE266 4.6 22.2 1.0
CB A:SER262 4.6 23.7 1.0
CB A:SER316 5.0 23.1 0.5

Chlorine binding site 3 out of 3 in 1vme

Go back to Chlorine Binding Sites List in 1vme
Chlorine binding site 3 out of 3 in the Crystal Structure of Flavoprotein (TM0755) From Thermotoga Maritima at 1.80 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Flavoprotein (TM0755) From Thermotoga Maritima at 1.80 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl399

b:26.6
occ:1.00
N B:TYR264 3.2 29.3 1.0
OH B:TYR318 3.3 25.5 0.5
N B:PHE266 3.4 23.6 1.0
N B:MSE263 3.4 31.9 1.0
N B:VAL267 3.5 20.9 1.0
N B:GLY265 3.6 27.2 1.0
OG B:SER262 3.8 24.8 1.0
CB B:PHE266 3.8 23.6 1.0
CG2 B:VAL267 3.9 23.3 1.0
CA B:PHE266 3.9 22.1 1.0
CA B:TYR264 4.0 26.6 1.0
C B:TYR264 4.1 29.8 1.0
CA B:MSE263 4.1 39.8 1.0
CD2 B:PHE266 4.1 32.1 1.0
C B:MSE263 4.1 34.8 1.0
CA B:SER262 4.2 25.1 1.0
OG B:SER316 4.2 32.2 0.5
C B:SER262 4.2 27.5 1.0
CB B:MSE263 4.2 36.8 1.0
CZ B:TYR318 4.2 16.2 0.5
C B:PHE266 4.2 23.4 1.0
OG B:SER316 4.2 23.1 0.5
CB B:VAL267 4.2 18.7 1.0
CE1 B:TYR318 4.3 26.4 0.5
C B:GLY265 4.3 26.2 1.0
CB B:TYR264 4.3 29.2 1.0
CA B:GLY265 4.5 27.8 1.0
CA B:VAL267 4.5 20.5 1.0
CG B:PHE266 4.5 26.4 1.0
CB B:SER262 4.6 24.2 1.0
CG B:MSE263 4.9 46.1 1.0
O B:TYR264 5.0 29.5 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Sat Jul 20 03:06:21 2024

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