Chlorine in PDB 1wpb: Structure of Escherichia Coli Yfbu Gene Product

The structure of Structure of Escherichia Coli Yfbu Gene Product, PDB code: 1wpb was solved by D.Borek, Y.Chen, M.Zheng, T.Skarina, A.Savchenko, A.Edwards, Z.Otwinowski, Midwest Center For Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	15.00 / 2.00
Space group	P 2 3 1
Cell size a, b, c (Å), α, β, γ (°)	230.521, 230.521, 230.521, 90.00, 90.00, 90.00
R / Rfree (%)	19 / 22.7

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 36;

Binding sites:

The binding sites of Chlorine atom in the Structure of Escherichia Coli Yfbu Gene Product (pdb code 1wpb). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 36 binding sites of Chlorine where determined in the Structure of Escherichia Coli Yfbu Gene Product, PDB code: 1wpb:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Chlorine binding site 1 out of 36 in the Structure of Escherichia Coli Yfbu Gene Product


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Escherichia Coli Yfbu Gene Product within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl2020 b:57.1 occ:0.50 ND1 A:HIS79 2.9 46.4 1.0 CE1 A:HIS79 3.4 46.2 1.0 CG2 A:VAL80 3.8 48.4 1.0 CA A:VAL80 4.0 46.4 1.0 O A:HIS79 4.1 44.8 1.0 N A:VAL80 4.1 44.9 1.0 CG A:HIS79 4.1 44.7 1.0 C A:HIS79 4.2 43.9 1.0 CB A:SER83 4.3 57.4 1.0 OG A:SER83 4.3 57.8 1.0 CB A:VAL80 4.6 46.6 1.0 NE2 A:HIS79 4.6 46.6 1.0 CB A:HIS79 4.7 43.3 1.0

Chlorine binding site 2 out of 36 in the Structure of Escherichia Coli Yfbu Gene Product


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of Escherichia Coli Yfbu Gene Product within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl2010 b:54.6 occ:0.50 ND1 B:HIS76 3.5 39.7 1.0 CE1 B:PHE126 4.2 37.0 1.0 CE1 B:HIS76 4.3 38.0 1.0 CA B:HIS76 4.4 37.5 1.0 ND1 B:HIS79 4.4 46.6 1.0 CG B:HIS76 4.5 36.7 1.0 CD1 B:PHE126 4.5 36.5 1.0 CB B:HIS76 4.6 38.2 1.0 CB B:HIS79 4.7 44.1 1.0 O B:HIS76 4.7 37.6 1.0 CG2 B:VAL80 4.7 48.8 1.0 CG B:HIS79 4.8 44.0 1.0

Chlorine binding site 3 out of 36 in the Structure of Escherichia Coli Yfbu Gene Product


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Structure of Escherichia Coli Yfbu Gene Product within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl2004 b:23.4 occ:1.00 NE2 C:GLN20 3.5 22.5 1.0 NE2 G:GLN20 3.6 23.5 1.0 CE C:MET23 4.0 27.6 1.0 CG C:GLN20 4.0 22.9 1.0 CG G:GLN20 4.1 23.4 1.0 CD C:GLN20 4.3 22.8 1.0 CE G:MET23 4.3 19.4 1.0 CD G:GLN20 4.3 23.0 1.0

Chlorine binding site 4 out of 36 in the Structure of Escherichia Coli Yfbu Gene Product


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Structure of Escherichia Coli Yfbu Gene Product within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl2006 b:27.9 occ:1.00 NE2 C:GLN13 3.3 23.1 1.0 NE2 G:GLN13 3.3 25.6 1.0 CG C:GLN13 3.9 22.4 1.0 CG G:GLN13 3.9 27.8 1.0 CD C:GLN13 4.1 25.3 1.0 CD G:GLN13 4.1 29.2 1.0 CD1 G:ILE16 4.8 25.1 1.0 CD1 C:ILE16 4.9 21.8 1.0 O C:HOH3091 5.0 34.7 1.0

Chlorine binding site 5 out of 36 in the Structure of Escherichia Coli Yfbu Gene Product


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Structure of Escherichia Coli Yfbu Gene Product within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl2011 b:70.6 occ:0.50 ND1 C:HIS76 3.9 38.4 1.0 CL C:CL2021 4.1 53.5 0.5 CE1 C:PHE126 4.3 42.0 1.0 CD1 C:PHE126 4.5 39.3 1.0 CE1 C:HIS76 4.7 41.0 1.0 CG2 C:VAL80 4.8 52.3 1.0 ND1 C:HIS79 4.8 46.7 1.0 CA C:HIS76 4.9 37.7 1.0 CB C:HIS125 4.9 44.8 1.0 CG C:HIS76 4.9 37.9 1.0 CB C:HIS79 5.0 47.9 1.0

Chlorine binding site 6 out of 36 in the Structure of Escherichia Coli Yfbu Gene Product


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Structure of Escherichia Coli Yfbu Gene Product within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl2021 b:53.5 occ:0.50 ND1 C:HIS79 3.2 46.7 1.0 CG2 C:VAL80 3.7 52.3 1.0 OG C:SER83 3.8 65.6 1.0 CE1 C:HIS79 3.9 48.7 1.0 CA C:VAL80 4.0 51.5 1.0 CL C:CL2011 4.1 70.6 0.5 O C:HIS79 4.2 48.4 1.0 N C:VAL80 4.2 49.8 1.0 C C:HIS79 4.3 48.9 1.0 CG C:HIS79 4.4 48.1 1.0 CB C:VAL80 4.5 51.8 1.0 CB C:SER83 4.6 63.8 1.0 CB C:HIS79 4.7 47.9 1.0

Chlorine binding site 7 out of 36 in the Structure of Escherichia Coli Yfbu Gene Product


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Structure of Escherichia Coli Yfbu Gene Product within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl2031 b:61.0 occ:0.50 CB C:ASN162 3.4 45.7 1.0 OG C:SER160 3.6 45.6 1.0 CG C:GLU163 3.8 44.3 1.0 ND2 C:ASN162 3.9 49.4 1.0 NE2 C:GLN166 3.9 51.6 1.0 CG C:ASN162 4.2 48.3 1.0 N C:GLU163 4.4 44.2 1.0 CD C:GLU163 4.5 45.9 1.0 CA C:ASN162 4.6 45.5 1.0 CB C:SER160 4.7 46.5 1.0 C C:ASN162 4.7 45.0 1.0 OE2 C:GLU163 4.8 55.0 1.0 CD C:GLN166 4.9 46.6 1.0 CB C:GLU163 5.0 43.4 1.0

Chlorine binding site 8 out of 36 in the Structure of Escherichia Coli Yfbu Gene Product


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 8 of Structure of Escherichia Coli Yfbu Gene Product within 5.0Å range: probe atom residue distance (Å) B Occ D:Cl2008 b:24.5 occ:1.00 NE2 D:GLN13 3.3 22.6 1.0 NE2 H:GLN13 3.3 23.5 1.0 CG D:GLN13 3.9 25.1 1.0 CG H:GLN13 3.9 25.0 1.0 CD D:GLN13 4.1 27.4 1.0 CD H:GLN13 4.1 25.7 1.0 CD1 D:ILE16 4.8 20.7 1.0 CD1 H:ILE16 4.9 24.6 1.0

Chlorine binding site 9 out of 36 in the Structure of Escherichia Coli Yfbu Gene Product


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 9 of Structure of Escherichia Coli Yfbu Gene Product within 5.0Å range: probe atom residue distance (Å) B Occ D:Cl2012 b:56.0 occ:0.50 ND1 D:HIS76 3.3 43.3 1.0 CL D:CL2022 3.9 52.9 0.5 CE1 D:PHE126 4.1 39.4 1.0 CE1 D:HIS76 4.1 43.5 1.0 CG D:HIS76 4.4 37.1 1.0 CA D:HIS76 4.4 35.8 1.0 CD1 D:PHE126 4.5 40.6 1.0 ND1 D:HIS79 4.5 46.1 1.0 O D:HIS76 4.6 37.3 1.0 CB D:HIS76 4.6 36.0 1.0 CB D:HIS79 4.7 45.2 1.0 CG2 D:VAL80 4.7 47.9 1.0 CG D:HIS79 4.9 45.9 1.0 C D:HIS76 5.0 37.2 1.0

Chlorine binding site 10 out of 36 in the Structure of Escherichia Coli Yfbu Gene Product


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 10 of Structure of Escherichia Coli Yfbu Gene Product within 5.0Å range: probe atom residue distance (Å) B Occ D:Cl2022 b:52.9 occ:0.50 ND1 D:HIS79 3.5 46.1 1.0 CG2 D:VAL80 3.6 47.9 1.0 CL D:CL2012 3.9 56.0 0.5 CA D:VAL80 4.1 47.4 1.0 CE1 D:HIS79 4.1 48.4 1.0 OG D:SER83 4.2 53.6 1.0 N D:VAL80 4.3 46.6 1.0 O D:HIS79 4.4 46.5 1.0 CB D:VAL80 4.4 47.8 1.0 C D:HIS79 4.4 46.1 1.0 CG D:HIS79 4.6 45.9 1.0 CB D:SER83 4.7 52.7 1.0 CB D:HIS79 4.9 45.2 1.0 CG1 D:VAL80 4.9 48.7 1.0

D.Borek, Y.Chen, M.Zheng, T.Skarina, A.Savchenko, A.Edwards, Z.Otwinowski. Crystal Structure of Escherichia Coli Yfbu Gene Product To Be Published.