Chlorine in PDB 1yk1: Structure of Natriuretic Peptide Receptor-C Complexed with Brain Natriuretic Peptide

The structure of Structure of Natriuretic Peptide Receptor-C Complexed with Brain Natriuretic Peptide, PDB code: 1yk1 was solved by X.He, K.C.Garcia, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 2.90
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	56.174, 136.380, 138.693, 90.00, 90.00, 90.00
R / Rfree (%)	25.3 / 28.9

The binding sites of Chlorine atom in the Structure of Natriuretic Peptide Receptor-C Complexed with Brain Natriuretic Peptide (pdb code 1yk1). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of Natriuretic Peptide Receptor-C Complexed with Brain Natriuretic Peptide, PDB code: 1yk1:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Structure of Natriuretic Peptide Receptor-C Complexed with Brain Natriuretic Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Natriuretic Peptide Receptor-C Complexed with Brain Natriuretic Peptide within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl513 b:54.7 occ:1.00 OG A:SER61 2.9 56.9 1.0 N A:VAL90 3.2 40.1 1.0 N A:CYS91 3.6 41.1 1.0 CB A:PRO89 3.7 40.1 1.0 CG A:PRO15 3.7 59.0 1.0 CB A:SER61 3.7 55.9 1.0 CE1 A:PHE22 3.7 51.4 1.0 CD A:PRO15 3.8 58.8 1.0 CA A:PRO89 3.9 40.1 1.0 SG A:CYS91 3.9 68.0 1.0 CA A:CYS63 4.0 56.0 1.0 CA A:LEU14 4.0 50.5 1.0 CA A:VAL90 4.0 40.1 1.0 C A:PRO89 4.0 40.1 1.0 CB A:VAL90 4.0 44.4 1.0 N A:PRO15 4.1 47.4 1.0 CB A:CYS91 4.2 61.7 1.0 O A:LEU13 4.2 73.8 1.0 C A:LEU14 4.3 52.9 1.0 C A:VAL90 4.4 40.1 1.0 CD1 A:PHE22 4.4 52.7 1.0 N A:CYS63 4.4 56.6 1.0 CB A:CYS63 4.5 78.4 1.0 CA A:CYS91 4.6 41.2 1.0 CG2 A:VAL90 4.7 43.2 1.0 CD2 A:LEU14 4.7 51.3 1.0 CZ A:PHE22 4.7 51.2 1.0 CB A:PRO15 4.8 60.6 1.0 N A:LEU14 4.9 49.1 1.0 C A:LEU13 4.9 72.6 1.0 CB A:LEU14 4.9 53.1 1.0 CG A:PRO89 5.0 40.1 1.0

Chlorine binding site 2 out of 2 in the Structure of Natriuretic Peptide Receptor-C Complexed with Brain Natriuretic Peptide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of Natriuretic Peptide Receptor-C Complexed with Brain Natriuretic Peptide within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl513 b:53.5 occ:1.00 N B:VAL90 2.8 40.1 1.0 OG B:SER61 3.1 63.3 1.0 N B:CYS91 3.2 40.1 1.0 CB B:PRO89 3.5 54.7 1.0 CA B:VAL90 3.7 40.1 1.0 SG B:CYS91 3.7 82.4 1.0 CA B:PRO89 3.7 43.3 1.0 C B:PRO89 3.7 45.2 1.0 CE1 B:PHE22 3.7 53.3 1.0 CB B:VAL90 3.8 57.9 1.0 CB B:CYS91 3.9 78.1 1.0 CB B:SER61 3.9 65.2 1.0 C B:VAL90 3.9 41.0 1.0 CD B:PRO15 4.0 47.0 1.0 CG B:PRO15 4.0 46.7 1.0 CA B:CYS91 4.2 40.1 1.0 CG2 B:VAL90 4.3 59.6 1.0 O B:LEU13 4.3 41.4 1.0 CA B:CYS63 4.4 58.2 1.0 CD1 B:PHE22 4.4 54.3 1.0 CA B:LEU14 4.5 49.8 1.0 CD2 B:LEU14 4.5 48.8 1.0 CZ B:PHE22 4.5 53.4 1.0 N B:PRO15 4.7 42.8 1.0 N B:CYS63 4.7 58.4 1.0 C B:LEU14 4.8 52.6 1.0 CG B:PRO89 4.8 55.8 1.0 O B:PRO89 4.9 43.1 1.0 CB B:CYS63 4.9 83.5 1.0

X.L.He, A.Dukkipati, K.C.Garcia. Structural Determinants of Natriuretic Peptide Receptor Specificity and Degeneracy. J.Mol.Biol. V. 361 698 2006.
ISSN: ISSN 0022-2836
PubMed: 16870210
DOI: 10.1016/J.JMB.2006.06.060