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Chlorine in PDB 1ykz: Effect of Alcohols on Protein Hydration

Enzymatic activity of Effect of Alcohols on Protein Hydration

All present enzymatic activity of Effect of Alcohols on Protein Hydration:
3.2.1.17;

Protein crystallography data

The structure of Effect of Alcohols on Protein Hydration, PDB code: 1ykz was solved by A.Deshpande, S.Nimsadkar, S.C.Mande, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 18.38 / 1.80
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 79.128, 79.128, 37.791, 90.00, 90.00, 90.00
R / Rfree (%) 19.3 / 22.5

Other elements in 1ykz:

The structure of Effect of Alcohols on Protein Hydration also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Effect of Alcohols on Protein Hydration (pdb code 1ykz). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Effect of Alcohols on Protein Hydration, PDB code: 1ykz:

Chlorine binding site 1 out of 1 in 1ykz

Go back to Chlorine Binding Sites List in 1ykz
Chlorine binding site 1 out of 1 in the Effect of Alcohols on Protein Hydration


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Effect of Alcohols on Protein Hydration within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Cl1037

b:20.0
occ:1.00
OH X:TYR23 3.0 15.1 1.0
CZ X:TYR23 3.7 15.4 1.0
CE2 X:TYR23 3.7 14.6 1.0
CA X:GLY104 4.1 18.0 1.0
N X:GLY104 4.6 19.1 1.0
O X:ARG21 4.6 23.1 1.0
O X:HOH3807 4.7 33.1 1.0
CE1 X:TYR23 4.9 14.9 1.0
CD2 X:TYR23 5.0 15.6 1.0

Reference:

A.Deshpande, S.Nimsadkar, S.C.Mande. Effect of Alcohols on Protein Hydration: Crystallographic Analysis of Hen Egg-White Lysozyme in the Presence of Alcohols. Acta Crystallogr.,Sect.D V. 61 1005 2005.
ISSN: ISSN 0907-4449
PubMed: 15983424
DOI: 10.1107/S0907444905009364
Page generated: Sat Dec 12 08:56:11 2020

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