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Chlorine in PDB 1z5y: Crystal Structure of the Disulfide-Linked Complex Between the N-Terminal Domain of the Electron Transfer Catalyst Dsbd and the Cytochrome C Biogenesis Protein Ccmg

Enzymatic activity of Crystal Structure of the Disulfide-Linked Complex Between the N-Terminal Domain of the Electron Transfer Catalyst Dsbd and the Cytochrome C Biogenesis Protein Ccmg

All present enzymatic activity of Crystal Structure of the Disulfide-Linked Complex Between the N-Terminal Domain of the Electron Transfer Catalyst Dsbd and the Cytochrome C Biogenesis Protein Ccmg:
1.8.1.8;

Protein crystallography data

The structure of Crystal Structure of the Disulfide-Linked Complex Between the N-Terminal Domain of the Electron Transfer Catalyst Dsbd and the Cytochrome C Biogenesis Protein Ccmg, PDB code: 1z5y was solved by C.U.Stirnimann, A.Rozhkova, U.Grauschopf, M.G.Gruetter, R.Glockshuber, G.Capitani, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 1.94
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 53.574, 53.165, 63.833, 90.00, 104.88, 90.00
R / Rfree (%) 23.5 / 27

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Disulfide-Linked Complex Between the N-Terminal Domain of the Electron Transfer Catalyst Dsbd and the Cytochrome C Biogenesis Protein Ccmg (pdb code 1z5y). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of the Disulfide-Linked Complex Between the N-Terminal Domain of the Electron Transfer Catalyst Dsbd and the Cytochrome C Biogenesis Protein Ccmg, PDB code: 1z5y:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 1z5y

Go back to Chlorine Binding Sites List in 1z5y
Chlorine binding site 1 out of 3 in the Crystal Structure of the Disulfide-Linked Complex Between the N-Terminal Domain of the Electron Transfer Catalyst Dsbd and the Cytochrome C Biogenesis Protein Ccmg


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Disulfide-Linked Complex Between the N-Terminal Domain of the Electron Transfer Catalyst Dsbd and the Cytochrome C Biogenesis Protein Ccmg within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl1002

b:48.0
occ:1.00
OG D:SER91 3.0 24.6 0.5
OG D:SER91 3.1 23.7 0.5
O D:HOH2167 3.1 45.3 1.0
CB D:HIS52 3.6 29.0 1.0
CA D:HIS52 3.6 27.4 1.0
ND1 D:HIS52 3.7 31.3 1.0
CB D:SER91 3.8 25.8 0.5
CB D:SER91 3.8 26.2 0.5
O D:HIS52 3.8 23.5 1.0
C D:HIS52 3.9 27.2 1.0
CG D:HIS52 4.1 27.9 1.0
O D:HOH2182 4.2 60.8 1.0
O D:HOH2026 4.7 28.2 1.0
O D:HOH2083 4.8 52.0 1.0
N D:ALA53 4.9 28.6 1.0
CE1 D:HIS52 4.9 28.6 1.0
N D:HIS52 4.9 26.7 1.0

Chlorine binding site 2 out of 3 in 1z5y

Go back to Chlorine Binding Sites List in 1z5y
Chlorine binding site 2 out of 3 in the Crystal Structure of the Disulfide-Linked Complex Between the N-Terminal Domain of the Electron Transfer Catalyst Dsbd and the Cytochrome C Biogenesis Protein Ccmg


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Disulfide-Linked Complex Between the N-Terminal Domain of the Electron Transfer Catalyst Dsbd and the Cytochrome C Biogenesis Protein Ccmg within 5.0Å range:

Chlorine binding site 3 out of 3 in 1z5y

Go back to Chlorine Binding Sites List in 1z5y
Chlorine binding site 3 out of 3 in the Crystal Structure of the Disulfide-Linked Complex Between the N-Terminal Domain of the Electron Transfer Catalyst Dsbd and the Cytochrome C Biogenesis Protein Ccmg


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of the Disulfide-Linked Complex Between the N-Terminal Domain of the Electron Transfer Catalyst Dsbd and the Cytochrome C Biogenesis Protein Ccmg within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Cl1003

b:30.4
occ:0.79
CG E:PRO56 3.3 63.1 1.0
CB E:PRO56 3.5 64.1 1.0
CD E:PRO56 4.6 62.5 1.0
CA E:PRO56 5.0 63.7 1.0

Reference:

C.U.Stirnimann, A.Rozhkova, U.Grauschopf, M.G.Gruetter, R.Glockshuber, G.Capitani. Structural Basis and Kinetics of Dsbd-Dependent Cytochrome C Maturation Structure V. 13 985 2005.
ISSN: ISSN 0969-2126
PubMed: 16004871
DOI: 10.1016/J.STR.2005.04.014
Page generated: Sat Dec 12 08:56:38 2020

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