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Chlorine in PDB 1zan: Crystal Structure of Anti-Ngf AD11 Fab

Protein crystallography data

The structure of Crystal Structure of Anti-Ngf AD11 Fab, PDB code: 1zan was solved by S.Covaceuszach, A.Cattaneo, A.Cassetta, D.Lamba, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 17.00 / 1.70
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 114.801, 69.354, 64.104, 90.00, 117.02, 90.00
R / Rfree (%) 19.6 / 24.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Anti-Ngf AD11 Fab (pdb code 1zan). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Anti-Ngf AD11 Fab, PDB code: 1zan:

Chlorine binding site 1 out of 1 in 1zan

Go back to Chlorine Binding Sites List in 1zan
Chlorine binding site 1 out of 1 in the Crystal Structure of Anti-Ngf AD11 Fab


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Anti-Ngf AD11 Fab within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Cl501

b:20.1
occ:1.00
N H:TRP47 3.2 18.3 1.0
N L:PHE98 3.4 18.2 1.0
O L:HOH555 3.5 26.6 1.0
CA H:GLU46 3.7 15.5 1.0
CA L:THR97 3.8 15.9 1.0
C H:GLU46 4.0 16.7 1.0
CD2 L:PHE98 4.0 17.0 1.0
CG2 L:THR97 4.0 30.1 1.0
C L:THR97 4.1 16.6 1.0
CB H:TRP47 4.1 16.3 1.0
CG H:GLU46 4.1 20.8 1.0
CB L:PHE98 4.1 16.1 1.0
O H:LEU45 4.2 18.0 1.0
O L:ARG96 4.2 20.6 1.0
CA H:TRP47 4.2 15.7 1.0
CA L:PHE98 4.3 18.0 1.0
O H:TRP47 4.4 17.5 1.0
CB H:GLU46 4.5 18.3 1.0
CB L:THR97 4.5 21.4 1.0
CG L:PHE98 4.6 16.4 1.0
O L:PHE98 4.6 19.8 1.0
N H:GLU46 4.8 15.4 1.0
ND2 H:ASN60 4.8 25.9 1.0
N L:THR97 4.8 17.0 1.0
C H:TRP47 4.8 15.4 1.0
C L:ARG96 4.9 19.0 1.0
C H:LEU45 4.9 13.2 1.0
C L:PHE98 5.0 21.8 1.0

Reference:

S.Covaceuszach, A.Cassetta, P.V.Konarev, S.Gonfloni, R.Rudolph, D.I.Svergun, D.Lamba, A.Cattaneo. Dissecting Ngf Interactions with Trka and P75 Receptors By Structural and Functional Studies of An Anti-Ngf Neutralizing Antibody. J.Mol.Biol. V. 381 881 2008.
ISSN: ISSN 0022-2836
PubMed: 18635195
DOI: 10.1016/J.JMB.2008.06.008
Page generated: Sat Dec 12 08:56:45 2020

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