Atomistry » Chlorine » PDB 1zch-1zoh » 1zjo
Atomistry »
  Chlorine »
    PDB 1zch-1zoh »
      1zjo »

Chlorine in PDB 1zjo: Crystal Structure of Human N-Acetylgalactosaminyltransferase (Gta) Complexed with Galactose-Grease

Enzymatic activity of Crystal Structure of Human N-Acetylgalactosaminyltransferase (Gta) Complexed with Galactose-Grease

All present enzymatic activity of Crystal Structure of Human N-Acetylgalactosaminyltransferase (Gta) Complexed with Galactose-Grease:
2.4.1.40;

Protein crystallography data

The structure of Crystal Structure of Human N-Acetylgalactosaminyltransferase (Gta) Complexed with Galactose-Grease, PDB code: 1zjo was solved by J.A.Letts, N.L.Rose, Y.R.Fang, C.H.Barry, S.N.Borisova, N.O.Seto, M.M.Palcic, S.V.Evans, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.64
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 52.570, 149.570, 79.390, 90.00, 90.00, 90.00
R / Rfree (%) 20.6 / 22.6

Other elements in 1zjo:

The structure of Crystal Structure of Human N-Acetylgalactosaminyltransferase (Gta) Complexed with Galactose-Grease also contains other interesting chemical elements:

Mercury (Hg) 5 atoms
Manganese (Mn) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Human N-Acetylgalactosaminyltransferase (Gta) Complexed with Galactose-Grease (pdb code 1zjo). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Human N-Acetylgalactosaminyltransferase (Gta) Complexed with Galactose-Grease, PDB code: 1zjo:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 1zjo

Go back to Chlorine Binding Sites List in 1zjo
Chlorine binding site 1 out of 2 in the Crystal Structure of Human N-Acetylgalactosaminyltransferase (Gta) Complexed with Galactose-Grease


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Human N-Acetylgalactosaminyltransferase (Gta) Complexed with Galactose-Grease within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl402

b:33.3
occ:1.00
CL A:CL406 2.7 27.0 1.0
OG1 A:THR119 2.8 23.3 1.0
CE1 A:PHE121 3.2 33.9 1.0
O A:HOH729 3.4 19.0 1.0
CD1 A:PHE121 3.4 32.4 1.0
O A:THR119 3.5 18.5 1.0
CB A:CYS209 3.6 19.9 1.0
CB A:THR119 3.7 17.5 1.0
HG A:HG403 3.7 30.7 0.7
C A:THR119 3.8 17.5 1.0
CA A:CYS209 4.0 17.0 1.0
N A:VAL120 4.2 17.5 1.0
N A:VAL210 4.3 16.5 1.0
O A:HOH728 4.4 27.0 1.0
CA A:VAL120 4.4 17.9 1.0
O A:VAL210 4.4 17.9 1.0
CA A:THR119 4.4 17.3 1.0
C A:CYS209 4.5 15.6 1.0
O A:HOH649 4.5 24.9 1.0
CZ A:PHE121 4.5 34.2 1.0
SG A:CYS209 4.7 26.8 1.0
C A:VAL120 4.8 19.2 1.0
CG A:PHE121 4.8 30.3 1.0
N A:PHE121 4.9 19.5 1.0
CG2 A:THR119 4.9 21.2 1.0
O A:HOH624 5.0 53.4 1.0

Chlorine binding site 2 out of 2 in 1zjo

Go back to Chlorine Binding Sites List in 1zjo
Chlorine binding site 2 out of 2 in the Crystal Structure of Human N-Acetylgalactosaminyltransferase (Gta) Complexed with Galactose-Grease


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Human N-Acetylgalactosaminyltransferase (Gta) Complexed with Galactose-Grease within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl406

b:27.0
occ:1.00
CL A:CL402 2.7 33.3 1.0
O A:HOH600 2.8 35.0 1.0
O A:HOH624 3.1 53.4 1.0
O A:VAL210 3.5 17.9 1.0
N A:VAL210 3.6 16.5 1.0
C A:CYS209 3.6 15.6 1.0
CB A:CYS209 3.6 19.9 1.0
C A:VAL210 3.8 17.4 1.0
O A:CYS209 4.0 14.9 1.0
CA A:VAL210 4.0 15.8 1.0
CA A:CYS209 4.0 17.0 1.0
O A:HOH649 4.0 24.9 1.0
O A:HOH729 4.2 19.0 1.0
CE2 A:PHE270 4.5 18.9 1.0
N A:ASP211 4.6 18.3 1.0
OD2 A:ASP211 4.7 24.4 1.0
O A:THR119 4.7 18.5 1.0
O A:GLY267 4.8 21.2 1.0
CD1 A:PHE121 4.9 32.4 1.0
CZ A:PHE270 4.9 18.0 1.0
OG1 A:THR119 5.0 23.3 1.0

Reference:

J.A.Letts, N.L.Rose, Y.R.Fang, C.H.Barry, S.N.Borisova, N.O.Seto, M.M.Palcic, S.V.Evans. Differential Recognition of the Type I and II H Antigen Acceptors By the Human Abo(H) Blood Group A and B Glycosyltransferases. J.Biol.Chem. V. 281 3625 2006.
ISSN: ISSN 0021-9258
PubMed: 16326711
DOI: 10.1074/JBC.M507620200
Page generated: Sat Dec 12 08:57:05 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy