Chlorine in PDB 1zmk: Crystal Structure of Human Alpha-Defensin-2 (Variant GLY16-> D-Ala), P 42 21 2 Space Group

The structure of Crystal Structure of Human Alpha-Defensin-2 (Variant GLY16-> D-Ala), P 42 21 2 Space Group, PDB code: 1zmk was solved by J.Lubkowski, A.Prahl, W.Lu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.47 / 1.30
Space group	P 42 21 2
Cell size a, b, c (Å), α, β, γ (°)	47.148, 47.148, 50.643, 90.00, 90.00, 90.00
R / Rfree (%)	16 / 17.7

The binding sites of Chlorine atom in the Crystal Structure of Human Alpha-Defensin-2 (Variant GLY16-> D-Ala), P 42 21 2 Space Group (pdb code 1zmk). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Human Alpha-Defensin-2 (Variant GLY16-> D-Ala), P 42 21 2 Space Group, PDB code: 1zmk:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Crystal Structure of Human Alpha-Defensin-2 (Variant GLY16-> D-Ala), P 42 21 2 Space Group


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Human Alpha-Defensin-2 (Variant GLY16-> D-Ala), P 42 21 2 Space Group within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl101 b:15.2 occ:1.00 N A:CYS1 2.0 18.7 1.0 N B:CYS1 2.1 16.4 1.0 O A:CYS1 2.2 19.7 1.0 O B:CYS1 2.2 16.1 1.0 O B:HOH223 2.3 43.4 1.0 C A:CYS1 2.9 16.4 1.0 C B:CYS1 2.9 15.3 1.0 CA A:CYS1 2.9 17.4 1.0 CA B:CYS1 2.9 15.8 1.0 CB B:CYS1 3.6 16.0 1.0 CB A:CYS1 3.8 18.8 1.0 O B:HOH224 4.0 24.3 0.5 CZ A:TYR2 4.1 25.4 1.0 N A:TYR2 4.2 16.8 1.0 CE1 A:TYR2 4.2 25.2 1.0 N B:TYR2 4.2 14.9 1.0 CE2 A:TYR2 4.4 26.2 1.0 CD1 A:TYR2 4.5 25.0 1.0 OH A:TYR2 4.5 27.3 1.0 SG B:CYS1 4.6 22.6 1.0 CD2 A:TYR2 4.6 26.2 1.0 O A:HOH133 4.7 25.0 0.5 CG A:TYR2 4.7 23.9 1.0 SG A:CYS1 4.9 20.6 1.0 CA A:TYR2 5.0 16.7 1.0 CA B:TYR2 5.0 15.1 1.0

Chlorine binding site 2 out of 2 in the Crystal Structure of Human Alpha-Defensin-2 (Variant GLY16-> D-Ala), P 42 21 2 Space Group


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Human Alpha-Defensin-2 (Variant GLY16-> D-Ala), P 42 21 2 Space Group within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl102 b:10.3 occ:0.25 O B:HOH218 3.1 11.3 1.0 CG B:ARG23 3.8 10.9 1.0 O B:GLY22 4.3 13.4 1.0 CD B:ARG23 4.5 11.5 1.0 CB B:ARG23 4.6 11.0 1.0 CA B:ARG23 4.6 11.0 1.0 NE B:ARG23 4.7 11.1 1.0

C.Xie, A.Prahl, B.Ericksen, Z.Wu, P.Zeng, X.Li, W.Y.Lu, J.Lubkowski, W.Lu. Reconstruction of the Conserved Beta-Bulge in Mammalian Defensins Using D-Amino Acids. J.Biol.Chem. V. 280 32921 2005.
ISSN: ISSN 0021-9258
PubMed: 15894545
DOI: 10.1074/JBC.M503084200