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Chlorine in PDB 1zmp: Crystal Structure of Human Defensin-5

Protein crystallography data

The structure of Crystal Structure of Human Defensin-5, PDB code: 1zmp was solved by J.Lubkowski, A.Szyk, W.Lu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.73 / 1.65
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 49.375, 49.375, 255.185, 90.00, 90.00, 120.00
R / Rfree (%) 19.8 / 24

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Human Defensin-5 (pdb code 1zmp). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Human Defensin-5, PDB code: 1zmp:

Chlorine binding site 1 out of 1 in 1zmp

Go back to Chlorine Binding Sites List in 1zmp
Chlorine binding site 1 out of 1 in the Crystal Structure of Human Defensin-5


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Human Defensin-5 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl151

b:29.5
occ:1.00
O B:HOH635 2.6 46.9 1.0
O A:HOH558 2.8 50.2 1.0
N B:ARG9 3.4 8.1 1.0
CG B:ARG9 3.6 6.9 1.0
CD B:ARG9 3.8 5.4 1.0
CB B:ARG9 4.0 6.7 1.0
CA B:GLY8 4.0 9.6 1.0
NE B:ARG9 4.2 5.3 1.0
C B:GLY8 4.2 8.0 1.0
CA B:ARG9 4.3 5.9 1.0
O B:HOH603 4.4 29.1 0.5
CZ B:ARG9 4.6 5.0 1.0
NH1 B:ARG9 4.8 4.3 1.0
O B:HOH568 4.9 22.7 1.0

Reference:

A.Szyk, Z.Wu, K.Tucker, D.Yang, W.Lu, J.Lubkowski. Crystal Structures of Human {Alpha}-Defensins HNP4, HD5, and HD6. Protein Sci. V. 15 2749 2006.
ISSN: ISSN 0961-8368
PubMed: 17088326
DOI: 10.1110/PS.062336606
Page generated: Sat Dec 12 08:57:13 2020

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