Chlorine in PDB 1zov: Crystal Structure of Monomeric Sarcosine Oxidase From Bacillus Sp. Ns- 129

All present enzymatic activity of Crystal Structure of Monomeric Sarcosine Oxidase From Bacillus Sp. Ns- 129:
1.5.3.1;

The structure of Crystal Structure of Monomeric Sarcosine Oxidase From Bacillus Sp. Ns- 129, PDB code: 1zov was solved by K.Nagata, H.Sasaki, J.Ohtsuka, M.Hua, M.Okai, K.Kubota, M.Kamo, K.Ito, T.Ichikawa, Y.Koyama, M.Tanokura, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	8.00 / 1.86
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	171.042, 171.042, 72.455, 90.00, 90.00, 90.00
R / Rfree (%)	15.8 / 19.1

The binding sites of Chlorine atom in the Crystal Structure of Monomeric Sarcosine Oxidase From Bacillus Sp. Ns- 129 (pdb code 1zov). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Monomeric Sarcosine Oxidase From Bacillus Sp. Ns- 129, PDB code: 1zov:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Crystal Structure of Monomeric Sarcosine Oxidase From Bacillus Sp. Ns- 129


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Monomeric Sarcosine Oxidase From Bacillus Sp. Ns- 129 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl1403 b:20.6 occ:1.00 O3' A:FAD1400 3.0 17.8 1.0 O A:HOH1424 3.1 21.4 1.0 N A:GLY344 3.2 20.0 1.0 N A:THR318 3.3 21.3 1.0 C3' A:FAD1400 3.5 17.7 1.0 N A:SER343 3.5 20.2 1.0 CA A:TYR317 3.6 21.3 1.0 C A:PHE342 3.7 19.7 1.0 CA A:GLY344 3.8 19.9 1.0 CB A:PHE342 3.9 18.9 1.0 C A:TYR317 3.9 21.7 1.0 O A:HOH1412 4.1 20.4 1.0 CA A:PHE342 4.1 19.8 1.0 O A:MET316 4.2 21.1 1.0 O A:PHE342 4.2 19.7 1.0 C A:SER343 4.2 20.2 1.0 CB A:TYR317 4.2 21.6 1.0 C1' A:FAD1400 4.2 17.3 1.0 CA A:SER343 4.3 20.0 1.0 O A:THR318 4.3 20.3 1.0 C5' A:FAD1400 4.3 17.7 1.0 N A:PHE342 4.3 20.4 1.0 CA A:THR318 4.4 21.0 1.0 C2' A:FAD1400 4.5 17.4 1.0 C4' A:FAD1400 4.5 17.8 1.0 CB A:THR318 4.6 21.6 1.0 C A:THR318 4.7 21.0 1.0 CD2 A:TYR317 4.7 20.8 1.0 OG1 A:THR318 4.7 23.0 1.0 C A:GLY344 4.7 20.1 1.0 N A:TYR317 4.8 21.4 1.0 OG A:SER43 4.8 21.8 1.0 CG A:TYR317 4.8 21.5 1.0 N A:HIS345 4.9 19.3 1.0 C A:MET316 4.9 21.4 1.0

Chlorine binding site 2 out of 2 in the Crystal Structure of Monomeric Sarcosine Oxidase From Bacillus Sp. Ns- 129


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Monomeric Sarcosine Oxidase From Bacillus Sp. Ns- 129 within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl2403 b:19.2 occ:1.00 O B:HOH2431 2.9 24.1 1.0 O3' B:FAD2400 3.0 16.0 1.0 N B:GLY344 3.2 17.4 1.0 N B:THR318 3.3 19.6 1.0 N B:SER343 3.5 18.3 1.0 C3' B:FAD2400 3.5 16.8 1.0 CA B:TYR317 3.6 18.7 1.0 C B:PHE342 3.7 18.8 1.0 CB B:PHE342 3.9 18.7 1.0 C B:TYR317 3.9 19.8 1.0 CA B:GLY344 3.9 17.1 1.0 O B:HOH2411 4.1 19.2 1.0 CA B:PHE342 4.1 18.3 1.0 C B:SER343 4.2 18.0 1.0 O B:PHE342 4.2 20.0 1.0 CB B:TYR317 4.2 19.0 1.0 C5' B:FAD2400 4.2 17.3 1.0 CA B:SER343 4.3 18.1 1.0 O B:MET316 4.3 18.1 1.0 O B:THR318 4.3 19.4 1.0 C1' B:FAD2400 4.3 15.6 1.0 N B:PHE342 4.3 18.3 1.0 CA B:THR318 4.3 19.8 1.0 C4' B:FAD2400 4.5 16.9 1.0 CB B:THR318 4.5 20.0 1.0 C2' B:FAD2400 4.5 15.9 1.0 C B:THR318 4.7 19.9 1.0 OG1 B:THR318 4.7 19.3 1.0 CD2 B:TYR317 4.7 18.7 1.0 OG B:SER43 4.7 19.1 1.0 N B:TYR317 4.7 18.7 1.0 C B:GLY344 4.8 17.5 1.0 CG B:TYR317 4.8 18.2 1.0 N B:HIS345 4.9 17.3 1.0 CB B:SER43 4.9 18.3 1.0 C B:MET316 4.9 18.3 1.0

K.Nagata, H.Sasaki, M.Hua, M.Okai, K.Kubota, M.Kamo, K.Ito, T.Ichikawa, Y.Koyama, M.Tanokura. Crystal Structure of Monomeric Sarcosine Oxidase From Bacillus Sp. Ns-129 Reveals Multiple Conformations at the Active-Site Loop Proc.Jpn.Acad.,Ser.B V. 81 220 2005.
ISSN: ISSN 0386-2208