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Chlorine in PDB 237l: The Response of T4 Lysozyme to Large-to-Small Substitutions Within the Core and Its Relation to the Hydrophobic Effect

Enzymatic activity of The Response of T4 Lysozyme to Large-to-Small Substitutions Within the Core and Its Relation to the Hydrophobic Effect

All present enzymatic activity of The Response of T4 Lysozyme to Large-to-Small Substitutions Within the Core and Its Relation to the Hydrophobic Effect:
3.2.1.17;

Protein crystallography data

The structure of The Response of T4 Lysozyme to Large-to-Small Substitutions Within the Core and Its Relation to the Hydrophobic Effect, PDB code: 237l was solved by J.Xu, W.A.Baase, E.Baldwin, B.W.Matthews, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 1.70
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 60.840, 60.840, 97.040, 90.00, 90.00, 120.00
R / Rfree (%) 16 / n/a

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Response of T4 Lysozyme to Large-to-Small Substitutions Within the Core and Its Relation to the Hydrophobic Effect (pdb code 237l). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the The Response of T4 Lysozyme to Large-to-Small Substitutions Within the Core and Its Relation to the Hydrophobic Effect, PDB code: 237l:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 237l

Go back to Chlorine Binding Sites List in 237l
Chlorine binding site 1 out of 2 in the The Response of T4 Lysozyme to Large-to-Small Substitutions Within the Core and Its Relation to the Hydrophobic Effect


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Response of T4 Lysozyme to Large-to-Small Substitutions Within the Core and Its Relation to the Hydrophobic Effect within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl173

b:2.6
occ:1.00
O A:HOH209 3.0 34.0 1.0
N A:ASN144 3.3 9.4 1.0
N A:ARG145 3.3 16.4 1.0
C A:THR142 3.5 20.1 1.0
CA A:THR142 3.6 11.5 1.0
CB A:THR142 3.7 17.5 1.0
CB A:ASN144 3.7 14.4 1.0
O A:THR142 3.8 14.3 1.0
CA A:ASN144 3.8 13.6 1.0
N A:PRO143 3.8 16.4 1.0
CB A:ARG145 4.0 22.1 1.0
C A:ASN144 4.1 24.9 1.0
C A:PRO143 4.2 13.7 1.0
CA A:ARG145 4.3 14.8 1.0
CD A:PRO143 4.3 15.4 1.0
CG2 A:THR142 4.4 16.4 1.0
CA A:PRO143 4.6 13.2 1.0
CG A:ASN144 4.6 25.3 1.0
ND2 A:ASN144 4.7 30.4 1.0
OG1 A:THR142 4.9 19.7 1.0

Chlorine binding site 2 out of 2 in 237l

Go back to Chlorine Binding Sites List in 237l
Chlorine binding site 2 out of 2 in the The Response of T4 Lysozyme to Large-to-Small Substitutions Within the Core and Its Relation to the Hydrophobic Effect


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Response of T4 Lysozyme to Large-to-Small Substitutions Within the Core and Its Relation to the Hydrophobic Effect within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl178

b:5.9
occ:0.50
O A:HOH215 3.1 18.6 1.0
O A:HOH182 3.3 22.8 1.0
O A:HOH200 3.6 35.5 1.0
O A:HOH246 3.7 67.7 1.0
CE1 A:HIS31 4.0 16.7 1.0
CB A:ALA49 4.1 15.6 1.0
NE2 A:HIS31 4.1 13.8 1.0
NE2 A:GLN69 4.4 16.2 1.0
O A:HOH282 4.6 45.0 1.0
CA A:ALA49 4.6 20.7 1.0
O A:HOH202 4.7 76.1 1.0
CD2 A:LEU66 4.8 21.0 1.0

Reference:

J.Xu, W.A.Baase, E.Baldwin, B.W.Matthews. The Response of T4 Lysozyme to Large-to-Small Substitutions Within the Core and Its Relation to the Hydrophobic Effect. Protein Sci. V. 7 158 1998.
ISSN: ISSN 0961-8368
PubMed: 9514271
Page generated: Sat Dec 12 08:57:53 2020

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