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Chlorine in PDB 259l: An Adaptable Metal-Binding Site Engineered Into T4 Lysozyme

Enzymatic activity of An Adaptable Metal-Binding Site Engineered Into T4 Lysozyme

All present enzymatic activity of An Adaptable Metal-Binding Site Engineered Into T4 Lysozyme:
3.2.1.17;

Protein crystallography data

The structure of An Adaptable Metal-Binding Site Engineered Into T4 Lysozyme, PDB code: 259l was solved by J.W.Wray, W.A.Baase, G.J.Ostheimer, B.W.Matthews, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.92
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 62.140, 62.140, 96.810, 90.00, 90.00, 120.00
R / Rfree (%) 18.6 / n/a

Other elements in 259l:

The structure of An Adaptable Metal-Binding Site Engineered Into T4 Lysozyme also contains other interesting chemical elements:

Cobalt (Co) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the An Adaptable Metal-Binding Site Engineered Into T4 Lysozyme (pdb code 259l). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the An Adaptable Metal-Binding Site Engineered Into T4 Lysozyme, PDB code: 259l:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 259l

Go back to Chlorine Binding Sites List in 259l
Chlorine binding site 1 out of 2 in the An Adaptable Metal-Binding Site Engineered Into T4 Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of An Adaptable Metal-Binding Site Engineered Into T4 Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl173

b:39.9
occ:1.00
N A:ARG145 3.2 27.4 1.0
N A:ASN144 3.4 19.5 1.0
C A:HIS142 3.6 20.1 1.0
CA A:HIS142 3.6 8.4 1.0
CB A:HIS142 3.7 9.9 1.0
CB A:ASN144 3.8 23.0 1.0
CB A:ARG145 3.9 36.6 1.0
CA A:ASN144 3.9 15.6 1.0
O A:HIS142 3.9 13.9 1.0
N A:PRO143 3.9 17.2 1.0
C A:ASN144 4.0 28.4 1.0
CA A:ARG145 4.1 24.7 1.0
CD A:PRO143 4.2 19.3 1.0
ND2 A:ASN144 4.2 0.0 1.0
C A:PRO143 4.3 8.3 1.0
CG A:ASN144 4.4 81.1 1.0
CA A:PRO143 4.7 20.1 1.0
CG A:HIS142 4.9 14.1 1.0
N A:HIS142 5.0 15.2 1.0

Chlorine binding site 2 out of 2 in 259l

Go back to Chlorine Binding Sites List in 259l
Chlorine binding site 2 out of 2 in the An Adaptable Metal-Binding Site Engineered Into T4 Lysozyme


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of An Adaptable Metal-Binding Site Engineered Into T4 Lysozyme within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl178

b:34.0
occ:0.50
O A:HOH235 3.0 29.0 1.0
O A:HOH182 3.3 28.2 1.0
O A:HOH198 3.9 34.0 1.0
NE2 A:GLN69 4.1 18.4 1.0
CE1 A:HIS31 4.2 7.8 1.0
CB A:ALA49 4.2 19.0 1.0
NE2 A:HIS31 4.5 20.0 1.0
CA A:ALA49 4.7 16.7 1.0
O A:HOH223 4.7 39.7 1.0
CD2 A:LEU66 4.8 25.3 1.0

Reference:

J.W.Wray, W.A.Baase, G.J.Ostheimer, X.J.Zhang, B.W.Matthews. Use of A Non-Rigid Region in T4 Lysozyme to Design An Adaptable Metal-Binding Site. Protein Eng. V. 13 313 2000.
ISSN: ISSN 0269-2139
PubMed: 10835104
DOI: 10.1093/PROTEIN/13.5.313
Page generated: Sat Jul 20 05:04:00 2024

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