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Chlorine in PDB 2amv: The Structure of Glycogen Phosphorylase B with An Alkyl- Dihydropyridine-Dicarboxylic Acid

Enzymatic activity of The Structure of Glycogen Phosphorylase B with An Alkyl- Dihydropyridine-Dicarboxylic Acid

All present enzymatic activity of The Structure of Glycogen Phosphorylase B with An Alkyl- Dihydropyridine-Dicarboxylic Acid:
2.4.1.1;

Protein crystallography data

The structure of The Structure of Glycogen Phosphorylase B with An Alkyl- Dihydropyridine-Dicarboxylic Acid, PDB code: 2amv was solved by S.E.Zographos, N.G.Oikonomakos, L.N.Johnson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 2.30
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 127.110, 127.110, 115.460, 90.00, 90.00, 90.00
R / Rfree (%) 20.1 / 28.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Structure of Glycogen Phosphorylase B with An Alkyl- Dihydropyridine-Dicarboxylic Acid (pdb code 2amv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the The Structure of Glycogen Phosphorylase B with An Alkyl- Dihydropyridine-Dicarboxylic Acid, PDB code: 2amv:

Chlorine binding site 1 out of 1 in 2amv

Go back to Chlorine Binding Sites List in 2amv
Chlorine binding site 1 out of 1 in the The Structure of Glycogen Phosphorylase B with An Alkyl- Dihydropyridine-Dicarboxylic Acid


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Structure of Glycogen Phosphorylase B with An Alkyl- Dihydropyridine-Dicarboxylic Acid within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl930

b:2.0
occ:1.00
 CL2 A:BIN930 0.0 2.0 1.0
C2 A:BIN930 1.6 18.3 1.0
C3 A:BIN930 2.6 17.6 1.0
C1 A:BIN930 2.9 19.1 1.0
O A:HOH1496 3.1 42.2 1.0
NE A:ARG193 3.2 25.0 1.0
O3A A:BIN930 3.5 18.9 1.0
C7 A:BIN930 3.5 15.7 1.0
CZ A:ARG193 3.5 26.2 1.0
O8 A:BIN930 3.5 14.1 1.0
NH2 A:ARG193 3.6 25.1 1.0
OD2 A:ASP227 3.6 15.3 1.0
O A:HOH1308 3.9 22.0 1.0
NH2 A:ARG242 3.9 18.1 1.0
CD A:ARG193 3.9 20.2 1.0
C4 A:BIN930 4.0 17.9 1.0
C20 A:BIN930 4.0 19.2 1.0
C21 A:BIN930 4.1 14.7 1.0
C19 A:BIN930 4.1 17.0 1.0
C6 A:BIN930 4.2 18.4 1.0
NH1 A:ARG193 4.2 27.9 1.0
C13 A:BIN930 4.3 15.3 1.0
CG A:ARG193 4.4 25.0 1.0
C18 A:BIN930 4.4 16.1 1.0
C12 A:BIN930 4.4 16.2 1.0
CE2 A:PHE196 4.5 19.7 1.0
C8 A:BIN930 4.5 12.9 1.0
C5 A:BIN930 4.6 21.8 1.0
CG A:ASP227 4.8 17.4 1.0

Reference:

S.E.Zographos, N.G.Oikonomakos, K.E.Tsitsanou, D.D.Leonidas, E.D.Chrysina, V.T.Skamnaki, H.Bischoff, S.Goldmann, K.A.Watson, L.N.Johnson. The Structure of Glycogen Phosphorylase B with An Alkyldihydropyridine-Dicarboxylic Acid Compound, A Novel and Potent Inhibitor. Structure V. 5 1413 1997.
ISSN: ISSN 0969-2126
PubMed: 9384557
DOI: 10.1016/S0969-2126(97)00292-X
Page generated: Sat Jul 20 05:18:00 2024

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