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Chlorine in PDB 2awp: Crystal Structure of Plasmodium Knowlesi Structure of Iron Super-Oxide Dismutase

Enzymatic activity of Crystal Structure of Plasmodium Knowlesi Structure of Iron Super-Oxide Dismutase

All present enzymatic activity of Crystal Structure of Plasmodium Knowlesi Structure of Iron Super-Oxide Dismutase:
1.15.1.1;

Protein crystallography data

The structure of Crystal Structure of Plasmodium Knowlesi Structure of Iron Super-Oxide Dismutase, PDB code: 2awp was solved by A.Dong, Y.Zhao, J.Lew, Z.Alam, M.Melone, G.Wasney, M.Vedadi, I.Koeieradzki, A.M.Edwards, C.H.Arrowsmith, J.Weigelt, M.Sundstrom, A.Bochkarev, R.Hui, M.Amani, Structural Genomicsconsortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 2.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 55.240, 79.053, 88.672, 90.00, 90.00, 90.00
R / Rfree (%) 15.8 / 22.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Plasmodium Knowlesi Structure of Iron Super-Oxide Dismutase (pdb code 2awp). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Plasmodium Knowlesi Structure of Iron Super-Oxide Dismutase, PDB code: 2awp:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2awp

Go back to Chlorine Binding Sites List in 2awp
Chlorine binding site 1 out of 2 in the Crystal Structure of Plasmodium Knowlesi Structure of Iron Super-Oxide Dismutase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Plasmodium Knowlesi Structure of Iron Super-Oxide Dismutase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl2002

b:14.0
occ:1.00
ND2 A:ASN25 3.2 8.9 1.0
CG A:GLU22 3.7 10.2 1.0
CA A:GLU22 4.0 10.3 1.0
CB A:ASN25 4.0 7.8 1.0
CE2 A:PHE26 4.1 11.4 1.0
CB A:GLU22 4.1 11.1 1.0
CG A:ASN25 4.1 9.9 1.0
O A:HOH2158 4.3 25.7 1.0
CD A:GLU22 4.6 11.8 1.0
O A:GLU22 4.6 9.0 1.0
CD2 A:PHE26 4.7 11.4 1.0
C A:GLU22 4.8 9.7 1.0
CZ A:PHE26 4.9 9.4 1.0
N A:GLU22 4.9 10.5 1.0
OE2 A:GLU22 5.0 13.0 1.0
O A:HOH2173 5.0 26.5 1.0

Chlorine binding site 2 out of 2 in 2awp

Go back to Chlorine Binding Sites List in 2awp
Chlorine binding site 2 out of 2 in the Crystal Structure of Plasmodium Knowlesi Structure of Iron Super-Oxide Dismutase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Plasmodium Knowlesi Structure of Iron Super-Oxide Dismutase within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl2001

b:13.4
occ:1.00
O B:HOH3060 3.1 16.7 1.0
NE2 B:HIS90 3.2 15.4 1.0
N B:TRP185 3.3 9.8 1.0
CB B:TRP185 3.7 8.9 1.0
CB B:CYS85 3.8 13.0 1.0
SG B:CYS85 3.8 14.5 1.0
CA B:CYS85 3.8 14.2 1.0
N B:ASN186 3.8 10.5 1.0
ND2 B:ASN186 3.9 18.8 1.0
CA B:TRP185 3.9 9.4 1.0
CD1 B:TRP185 3.9 8.7 1.0
CE1 B:HIS90 4.0 12.1 1.0
OD1 B:ASN184 4.1 13.1 1.0
O B:VAL183 4.1 9.6 1.0
CG B:TRP185 4.2 9.3 1.0
C B:ASN184 4.2 9.9 1.0
CG B:ASN186 4.2 13.9 1.0
CD2 B:HIS90 4.2 12.6 1.0
CA B:ASN184 4.2 9.8 1.0
C B:TRP185 4.3 10.0 1.0
N B:GLY86 4.4 12.9 1.0
C B:CYS85 4.4 13.4 1.0
OD1 B:ASN186 4.5 17.9 1.0
O B:ASN84 4.5 15.3 1.0
CB B:ASN186 4.8 11.3 1.0
CG B:ASN184 4.9 10.4 1.0
CA B:ASN186 4.9 10.9 1.0
N B:CYS85 5.0 14.0 1.0
O B:HOH3053 5.0 16.4 1.0

Reference:

M.Vedadi, J.Lew, J.Artz, M.Amani, Y.Zhao, A.Dong, G.A.Wasney, M.Gao, T.Hills, S.Brokx, W.Qiu, S.Sharma, A.Diassiti, Z.Alam, M.Melone, A.Mulichak, A.Wernimont, J.Bray, P.Loppnau, O.Plotnikova, K.Newberry, E.Sundararajan, S.Houston, J.Walker, W.Tempel, A.Bochkarev, I.Kozieradzki, A.Edwards, C.Arrowsmith, D.Roos, K.Kain, R.Hui. Genome-Scale Protein Expression and Structural Biology of Plasmodium Falciparum and Related Apicomplexan Organisms. Mol.Biochem.Parasitol. V. 151 100 2007.
ISSN: ISSN 0166-6851
PubMed: 17125854
DOI: 10.1016/J.MOLBIOPARA.2006.10.011
Page generated: Sat Jul 20 05:27:14 2024

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