Chlorine in PDB 2bjk: Crystal Analysis of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus with Bound Nad and Citrate.

All present enzymatic activity of Crystal Analysis of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus with Bound Nad and Citrate.:
1.5.1.12;

The structure of Crystal Analysis of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus with Bound Nad and Citrate., PDB code: 2bjk was solved by E.Inagaki, T.H.Tahirov, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	33.29 / 1.4
Space group	H 3
Cell size a, b, c (Å), α, β, γ (°)	102.436, 102.436, 278.559, 90.00, 90.00, 120.00
R / Rfree (%)	15.6 / 17

The binding sites of Chlorine atom in the Crystal Analysis of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus with Bound Nad and Citrate. (pdb code 2bjk). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Analysis of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus with Bound Nad and Citrate., PDB code: 2bjk:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Crystal Analysis of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus with Bound Nad and Citrate.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Analysis of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus with Bound Nad and Citrate. within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl1523 b:17.2 occ:1.00 ND1 A:HIS465 2.9 11.4 0.5 ND1 A:HIS465 3.1 11.4 0.5 NZ B:LYS510 3.2 9.8 1.0 O A:HOH2637 3.3 27.2 1.0 O B:HOH2106 3.3 26.2 1.0 CD B:LYS510 3.7 8.2 1.0 CE1 A:HIS465 3.7 13.1 0.5 CE B:LYS510 3.8 8.2 1.0 CE1 A:PHE488 3.9 8.4 1.0 CA A:HIS465 3.9 7.7 1.0 O A:ARG462 3.9 14.9 1.0 CG A:HIS465 4.0 11.3 0.5 CE1 A:HIS465 4.0 11.6 0.5 CG A:HIS465 4.1 10.0 0.5 O A:PHE464 4.2 7.5 1.0 CB A:HIS465 4.3 10.5 1.0 N A:HIS465 4.6 7.2 1.0 CZ A:PHE488 4.6 8.5 1.0 C A:PHE464 4.7 7.5 1.0 CD1 A:PHE488 4.7 8.0 1.0 C A:HIS465 4.8 6.9 1.0 N A:VAL466 4.8 6.4 1.0 CG1 B:VAL172 4.8 11.5 1.0 O B:HOH2207 4.8 27.6 1.0 CG2 B:VAL172 4.8 10.8 1.0 C A:ARG462 4.9 11.6 1.0 CG B:LYS510 4.9 7.4 1.0 NE2 A:HIS465 4.9 11.8 0.5

Chlorine binding site 2 out of 2 in the Crystal Analysis of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus with Bound Nad and Citrate.


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Analysis of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus with Bound Nad and Citrate. within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl1524 b:18.2 occ:1.00 ND1 B:HIS465 2.9 11.1 0.5 ND1 B:HIS465 3.2 12.0 0.5 O B:HOH2315 3.2 24.4 1.0 NZ A:LYS510 3.2 10.2 1.0 O B:HOH2596 3.4 25.9 1.0 CD A:LYS510 3.7 9.1 1.0 CE1 B:HIS465 3.7 11.2 0.5 CE A:LYS510 3.8 9.0 1.0 CE1 B:PHE488 3.9 8.7 1.0 CA B:HIS465 3.9 8.5 1.0 CG B:HIS465 4.0 10.2 0.5 O B:ARG462 4.0 15.4 1.0 CE1 B:HIS465 4.1 12.4 0.5 CG B:HIS465 4.1 11.6 0.5 O B:PHE464 4.2 7.8 1.0 CB B:HIS465 4.3 10.1 1.0 N B:HIS465 4.6 8.0 1.0 C B:PHE464 4.7 7.6 1.0 CZ B:PHE488 4.7 8.3 1.0 CD1 B:PHE488 4.7 7.5 1.0 C B:HIS465 4.8 7.5 1.0 CG2 A:VAL172 4.8 11.5 1.0 N B:VAL466 4.8 7.1 1.0 CG A:LYS510 4.8 7.3 1.0 CG1 A:VAL172 4.8 12.6 1.0 O A:HOH2219 4.9 25.1 1.0 C B:ARG462 4.9 12.6 1.0 NE2 B:HIS465 4.9 10.6 0.5

E.Inagaki, N.Ohshima, H.Takahashi, C.Kuroishi, S.Yokoyama, T.H.Tahirov. Crystal Structure of Thermus Thermophilus Delta(1)- Pyrroline-5-Carboxylate Dehydrogenase. J.Mol.Biol. V. 362 490 2006.
ISSN: ISSN 0022-2836
PubMed: 16934832
DOI: 10.1016/J.JMB.2006.07.048