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Chlorine in PDB 2bmv: Apoflavodoxin From Helicobacter Pylori

Protein crystallography data

The structure of Apoflavodoxin From Helicobacter Pylori, PDB code: 2bmv was solved by M.Martinez-Julvez, J.A.Hermoso, J.Sancho, I.Perez-Dorado, N.Cremades, M.Bueno, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 9.00 / 2.11
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 36.610, 45.712, 86.652, 90.00, 90.00, 90.00
R / Rfree (%) 20 / 28.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Apoflavodoxin From Helicobacter Pylori (pdb code 2bmv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Apoflavodoxin From Helicobacter Pylori, PDB code: 2bmv:

Chlorine binding site 1 out of 1 in 2bmv

Go back to Chlorine Binding Sites List in 2bmv
Chlorine binding site 1 out of 1 in the Apoflavodoxin From Helicobacter Pylori


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Apoflavodoxin From Helicobacter Pylori within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1166

b:8.6
occ:1.00
O A:HOH2005 2.6 36.5 1.0
OG1 A:THR10 2.8 12.3 1.0
O A:HOH2006 3.1 33.1 1.0
OG A:SER12 3.2 19.9 1.0
N A:ALA15 3.2 14.1 1.0
CG A:PRO53 3.6 19.6 1.0
CB A:PRO53 3.7 18.8 1.0
CB A:ALA15 3.7 14.1 1.0
N A:ASN14 3.7 14.9 1.0
CB A:THR10 3.8 14.4 1.0
CB A:ASN14 3.9 15.6 1.0
N A:SER12 4.1 18.9 1.0
C A:ASN14 4.1 15.0 1.0
CA A:ALA15 4.1 14.9 1.0
CA A:ASN14 4.1 15.1 1.0
CA A:THR10 4.1 14.9 1.0
CB A:SER12 4.1 18.8 1.0
N A:GLY13 4.2 16.8 1.0
CD2 A:LEU86 4.3 19.7 1.0
N A:ASP11 4.3 17.3 1.0
CA A:SER12 4.5 18.6 1.0
C A:GLY13 4.5 15.5 1.0
CD A:PRO53 4.6 19.8 1.0
C A:THR10 4.7 16.2 1.0
C A:SER12 4.7 18.1 1.0
O A:GLY9 4.8 15.3 1.0
CA A:GLY13 4.9 16.1 1.0
O A:HOH2008 4.9 55.3 1.0

Reference:

M.Martinez-Julvez, N.Cremades, M.Bueno, I.Perez-Dorado, C.Maya, S.Cuesta-Lopez, D.Prada, F.Falo, J.A.Hermoso, J.Sancho. Common Conformational Changes in Flavodoxins Induced By Fmn and Anion Binding: the Structure of Helicobacter Pylori Apoflavodoxin. Proteins V. 69 581 2007.
ISSN: ISSN 0887-3585
PubMed: 17623845
DOI: 10.1002/PROT.21410
Page generated: Sat Jul 20 05:49:37 2024

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