Atomistry » Chlorine » PDB 2bwv-2c5h » 2c11
Atomistry »
  Chlorine »
    PDB 2bwv-2c5h »
      2c11 »

Chlorine in PDB 2c11: Crystal Structure of the 2-Hydrazinopyridine of Semicarbazide- Sensitive Amine Oxidase

Enzymatic activity of Crystal Structure of the 2-Hydrazinopyridine of Semicarbazide- Sensitive Amine Oxidase

All present enzymatic activity of Crystal Structure of the 2-Hydrazinopyridine of Semicarbazide- Sensitive Amine Oxidase:
1.4.3.6;

Protein crystallography data

The structure of Crystal Structure of the 2-Hydrazinopyridine of Semicarbazide- Sensitive Amine Oxidase, PDB code: 2c11 was solved by E.Jakobsson, G.J.Kleywegt, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 2.90
Space group P 43
Cell size a, b, c (Å), α, β, γ (°) 127.402, 127.402, 219.361, 90.00, 90.00, 90.00
R / Rfree (%) 21.5 / 27.6

Other elements in 2c11:

The structure of Crystal Structure of the 2-Hydrazinopyridine of Semicarbazide- Sensitive Amine Oxidase also contains other interesting chemical elements:

Copper (Cu) 30 atoms
Calcium (Ca) 8 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the 2-Hydrazinopyridine of Semicarbazide- Sensitive Amine Oxidase (pdb code 2c11). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Crystal Structure of the 2-Hydrazinopyridine of Semicarbazide- Sensitive Amine Oxidase, PDB code: 2c11:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 2c11

Go back to Chlorine Binding Sites List in 2c11
Chlorine binding site 1 out of 4 in the Crystal Structure of the 2-Hydrazinopyridine of Semicarbazide- Sensitive Amine Oxidase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the 2-Hydrazinopyridine of Semicarbazide- Sensitive Amine Oxidase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1739

b:47.5
occ:1.00
 N B:GLN560 3.5 67.1 1.0
NE A:ARG383 3.5 53.3 1.0
OG A:SER619 3.6 72.6 1.0
NH2 A:ARG383 3.9 53.7 1.0
CA B:LEU559 4.0 65.7 1.0
CE A:MET621 4.0 71.8 1.0
CZ A:ARG383 4.2 53.9 1.0
CB B:GLN560 4.2 64.6 1.0
C B:LEU559 4.3 66.9 1.0
CB B:LEU559 4.3 64.5 1.0
CA B:GLN560 4.4 64.1 1.0
SD A:MET621 4.4 72.2 1.0
CG B:GLN560 4.5 67.2 1.0
O B:GLN560 4.5 63.4 1.0
CD A:ARG383 4.5 53.8 1.0
CD1 A:LEU615 4.5 70.8 1.0
CG A:MET621 4.6 72.3 1.0
CB A:SER619 4.7 72.5 1.0
C B:GLN560 4.8 63.0 1.0
CD2 A:LEU615 4.8 71.4 1.0
O B:GLN558 4.9 69.3 1.0

Chlorine binding site 2 out of 4 in 2c11

Go back to Chlorine Binding Sites List in 2c11
Chlorine binding site 2 out of 4 in the Crystal Structure of the 2-Hydrazinopyridine of Semicarbazide- Sensitive Amine Oxidase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the 2-Hydrazinopyridine of Semicarbazide- Sensitive Amine Oxidase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1746

b:47.0
occ:1.00
 OG B:SER619 3.4 69.5 1.0
N A:GLN560 3.5 66.3 1.0
CB A:GLN560 3.6 64.1 1.0
CG A:GLN560 3.7 65.2 1.0
NE B:ARG383 3.8 49.3 1.0
CD1 B:LEU615 4.0 69.7 1.0
CD1 A:LEU559 4.0 66.2 1.0
NH2 B:ARG383 4.1 47.5 1.0
CA A:GLN560 4.1 63.9 1.0
CD2 B:LEU615 4.1 70.1 1.0
O A:GLN560 4.3 62.7 1.0
CE B:MET621 4.4 65.7 1.0
CB B:SER619 4.4 68.9 1.0
CZ B:ARG383 4.4 48.4 1.0
C A:LEU559 4.5 67.1 1.0
SD B:MET621 4.5 64.2 1.0
CG B:MET621 4.5 67.0 1.0
CA A:LEU559 4.5 66.3 1.0
C A:GLN560 4.6 63.2 1.0
CG B:LEU615 4.7 69.9 1.0
CD B:ARG383 4.8 49.8 1.0
CG A:LEU559 4.9 66.4 1.0

Chlorine binding site 3 out of 4 in 2c11

Go back to Chlorine Binding Sites List in 2c11
Chlorine binding site 3 out of 4 in the Crystal Structure of the 2-Hydrazinopyridine of Semicarbazide- Sensitive Amine Oxidase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of the 2-Hydrazinopyridine of Semicarbazide- Sensitive Amine Oxidase within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl1740

b:49.0
occ:1.00
 N D:GLN560 3.1 66.6 1.0
NE C:ARG383 3.1 54.7 1.0
NH2 C:ARG383 3.3 54.1 1.0
CZ C:ARG383 3.6 54.5 1.0
CB D:GLN560 3.7 64.2 1.0
O D:GLN560 3.7 64.0 1.0
CA D:GLN560 3.8 63.8 1.0
OG C:SER619 4.0 71.4 1.0
CA D:LEU559 4.0 65.8 1.0
C D:LEU559 4.0 66.7 1.0
C D:GLN560 4.1 63.8 1.0
CD1 C:LEU615 4.1 70.1 1.0
CG D:GLN560 4.2 66.8 1.0
CD C:ARG383 4.2 54.5 1.0
CB D:LEU559 4.3 64.9 1.0
CE C:MET621 4.3 72.5 1.0
SD C:MET621 4.5 72.4 1.0
CD2 C:LEU615 4.7 71.0 1.0
CG C:LEU615 4.9 71.0 1.0
CG C:MET621 4.9 73.3 1.0
NH1 C:ARG383 5.0 54.3 1.0
CB C:SER619 5.0 72.2 1.0

Chlorine binding site 4 out of 4 in 2c11

Go back to Chlorine Binding Sites List in 2c11
Chlorine binding site 4 out of 4 in the Crystal Structure of the 2-Hydrazinopyridine of Semicarbazide- Sensitive Amine Oxidase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of the 2-Hydrazinopyridine of Semicarbazide- Sensitive Amine Oxidase within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl1744

b:45.7
occ:1.00
 NE D:ARG383 3.2 48.7 1.0
CD1 C:LEU559 3.5 66.0 1.0
N C:GLN560 3.7 66.1 1.0
NH2 D:ARG383 3.7 48.0 1.0
CZ D:ARG383 3.9 48.5 1.0
CB C:GLN560 4.1 64.9 1.0
CE D:MET621 4.1 66.1 1.0
OG D:SER619 4.2 68.3 1.0
O C:GLN560 4.2 62.8 1.0
SD D:MET621 4.2 64.1 1.0
CD D:ARG383 4.3 49.9 1.0
CD1 D:LEU615 4.3 69.6 1.0
CA C:GLN560 4.4 64.7 1.0
CG C:GLN560 4.4 66.0 1.0
CD2 D:LEU615 4.5 70.1 1.0
CA C:LEU559 4.6 65.7 1.0
CG C:LEU559 4.6 66.1 1.0
C C:LEU559 4.6 65.9 1.0
CG D:MET621 4.6 66.8 1.0
C C:GLN560 4.7 63.2 1.0

Reference:

E.Jakobsson, J.Nilsson, D.Ogg, G.J.Kleywegt. Structure of Human Semicarbazide-Sensitive Amine Oxidase/Vascular Adhesion Protein-1. Acta Crystallogr. D Biol. V. 61 1550 2005CRYSTALLOGR..
ISSN: ISSN 0907-4449
PubMed: 16239734
DOI: 10.1107/S0907444905028805
Page generated: Sat Jul 20 06:02:48 2024

Last articles

Zn in 2YRC
Zn in 2YQP
Zn in 2YR2
Zn in 2YQL
Zn in 2YPT
Zn in 2YPA
Zn in 2YPU
Zn in 2YNW
Zn in 2YNT
Zn in 2YNV
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy