Atomistry » Chlorine » PDB 2cie-2dch » 2cnc
Atomistry »
  Chlorine »
    PDB 2cie-2dch »
      2cnc »

Chlorine in PDB 2cnc: Family 10 Xylanase

Protein crystallography data

The structure of Family 10 Xylanase, PDB code: 2cnc was solved by H.Xie, J.Flint, M.Vardakou, J.H.Lakey, R.J.Lewis, H.J.Gilbert, C.Dumon, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 56.70 / 2.4
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 46.904, 67.365, 105.156, 90.00, 90.00, 90.00
R / Rfree (%) 15.5 / 27.3

Other elements in 2cnc:

The structure of Family 10 Xylanase also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Family 10 Xylanase (pdb code 2cnc). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Family 10 Xylanase, PDB code: 2cnc:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2cnc

Go back to Chlorine Binding Sites List in 2cnc
Chlorine binding site 1 out of 2 in the Family 10 Xylanase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Family 10 Xylanase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1384

b:13.2
occ:1.00
N A:ALA52 3.3 12.4 1.0
O A:HOH2037 3.3 9.0 1.0
ND2 A:ASN77 3.3 10.7 1.0
O A:HOH2030 3.4 5.5 1.0
CA A:ASN51 3.6 8.4 1.0
CB A:ASN51 3.6 8.5 1.0
CB A:ASN77 3.7 8.5 1.0
C A:ASN51 3.9 10.4 1.0
CG A:ASN77 4.0 9.9 1.0
CB A:ALA52 4.0 11.0 1.0
O A:HOH2016 4.2 8.8 1.0
CA A:ALA52 4.2 11.8 1.0
N A:ASN77 4.5 6.2 1.0
CA A:ASN77 4.6 8.1 1.0
N A:ASN51 4.9 7.1 1.0
CG A:ASN51 5.0 7.8 1.0
CB A:GLU76 5.0 4.2 1.0

Chlorine binding site 2 out of 2 in 2cnc

Go back to Chlorine Binding Sites List in 2cnc
Chlorine binding site 2 out of 2 in the Family 10 Xylanase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Family 10 Xylanase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1385

b:18.3
occ:1.00
O A:HOH2238 2.8 7.2 1.0
CG A:PRO306 3.7 5.8 1.0
CB A:PRO306 3.8 6.7 1.0
CD A:PRO306 3.8 6.2 1.0
CD1 A:TYR301 4.2 10.7 1.0
CE1 A:TYR301 4.5 10.8 1.0
O A:HOH2233 4.7 5.9 1.0
N A:PRO306 4.7 6.1 1.0
O A:GLY304 4.7 8.8 1.0
CA A:PRO306 4.8 7.5 1.0

Reference:

H.Xie, J.Flint, M.Vardakou, J.H.Lakey, R.J.Lewis, H.J.Gilbert, C.Dumon. Probing the Structural Basis For the Difference in Thermostability Displayed By Family 10 Xylanases. J.Mol.Biol. V. 360 157 2006.
ISSN: ISSN 0022-2836
PubMed: 16762367
DOI: 10.1016/J.JMB.2006.05.002
Page generated: Sat Jul 20 06:22:51 2024

Last articles

Zn in 9J0N
Zn in 9J0O
Zn in 9J0P
Zn in 9FJX
Zn in 9EKB
Zn in 9C0F
Zn in 9CAH
Zn in 9CH0
Zn in 9CH3
Zn in 9CH1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy