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Chlorine in PDB 2dd7: A Gfp-Like Protein From Marine Copepod, Chiridius Poppei

Protein crystallography data

The structure of A Gfp-Like Protein From Marine Copepod, Chiridius Poppei, PDB code: 2dd7 was solved by K.Suto, H.Masuda, Y.Takenaka, H.Mizuno, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.82 / 1.90
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 113.478, 133.494, 108.733, 90.00, 90.00, 90.00
R / Rfree (%) 20.4 / 23.2

Chlorine Binding Sites:

The binding sites of Chlorine atom in the A Gfp-Like Protein From Marine Copepod, Chiridius Poppei (pdb code 2dd7). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the A Gfp-Like Protein From Marine Copepod, Chiridius Poppei, PDB code: 2dd7:

Chlorine binding site 1 out of 1 in 2dd7

Go back to Chlorine Binding Sites List in 2dd7
Chlorine binding site 1 out of 1 in the A Gfp-Like Protein From Marine Copepod, Chiridius Poppei


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of A Gfp-Like Protein From Marine Copepod, Chiridius Poppei within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl502

b:25.7
occ:0.50
O A:HOH1199 2.9 28.8 1.0
N A:LYS18 3.1 13.3 1.0
CB A:LYS18 3.8 17.1 1.0
CA A:GLU17 3.8 13.7 1.0
C A:GLU17 3.9 14.4 1.0
CG A:LYS18 4.0 21.0 1.0
CA A:LYS18 4.0 15.4 1.0
O A:GLY16 4.1 14.9 1.0
CG A:GLU17 4.1 14.7 1.0
NZ A:LYS41 4.2 15.6 1.0
CD A:LYS18 4.4 25.6 1.0
CB A:GLU17 4.5 13.4 1.0
O A:LYS18 4.5 14.0 1.0
C A:LYS18 4.8 14.2 1.0
N A:GLU17 4.9 12.0 1.0
C A:GLY16 4.9 14.1 1.0

Reference:

K.Suto, H.Masuda, Y.Takenaka, F.I.Tsuji, H.Mizuno. Structural Basis For Red-Shifted Emission of A Gfp-Like Protein From the Marine Copepod Chiridius Poppei Genes Cells V. 14 727 2009.
ISSN: ISSN 1356-9597
PubMed: 19469881
DOI: 10.1111/J.1365-2443.2009.01305.X
Page generated: Sat Jul 20 06:30:03 2024

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