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Chlorine in PDB 2dfn: Structure of Shikimate Kinase From Mycobacterium Tuberculosis Complexed with Adp and Shikimate at 1.9 Angstrons of Resolution

Enzymatic activity of Structure of Shikimate Kinase From Mycobacterium Tuberculosis Complexed with Adp and Shikimate at 1.9 Angstrons of Resolution

All present enzymatic activity of Structure of Shikimate Kinase From Mycobacterium Tuberculosis Complexed with Adp and Shikimate at 1.9 Angstrons of Resolution:
2.7.1.71;

Protein crystallography data

The structure of Structure of Shikimate Kinase From Mycobacterium Tuberculosis Complexed with Adp and Shikimate at 1.9 Angstrons of Resolution, PDB code: 2dfn was solved by M.V.Dias, L.M.Faim, I.B.Vasconcelos, J.S.De Oliveira, L.A.Basso, D.S.Santos, W.F.De Azevedo, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.16 / 1.93
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 63.296, 63.296, 91.610, 90.00, 90.00, 120.00
R / Rfree (%) 20.2 / 26.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Shikimate Kinase From Mycobacterium Tuberculosis Complexed with Adp and Shikimate at 1.9 Angstrons of Resolution (pdb code 2dfn). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Structure of Shikimate Kinase From Mycobacterium Tuberculosis Complexed with Adp and Shikimate at 1.9 Angstrons of Resolution, PDB code: 2dfn:

Chlorine binding site 1 out of 1 in 2dfn

Go back to Chlorine Binding Sites List in 2dfn
Chlorine binding site 1 out of 1 in the Structure of Shikimate Kinase From Mycobacterium Tuberculosis Complexed with Adp and Shikimate at 1.9 Angstrons of Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Shikimate Kinase From Mycobacterium Tuberculosis Complexed with Adp and Shikimate at 1.9 Angstrons of Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1180

b:36.3
occ:1.00
 O7 A:SKM500 2.4 24.9 1.0
NZ A:LYS15 2.8 20.5 1.0
C6 A:SKM500 3.2 39.9 1.0
O3B A:ADP177 3.2 23.9 1.0
CA A:PRO11 3.3 26.9 1.0
O A:HOH296 3.3 38.9 1.0
O A:HOH348 3.4 40.5 1.0
C5 A:SKM500 3.5 27.2 1.0
N A:GLY80 3.5 23.8 1.0
CE A:LYS15 3.5 17.9 1.0
CA A:GLY80 3.6 20.4 1.0
CB A:PRO11 3.8 26.5 1.0
O A:HOH206 3.8 25.9 1.0
N A:PRO11 3.8 27.3 1.0
NE A:ARG117 3.9 39.8 1.0
PB A:ADP177 4.0 19.2 1.0
O1B A:ADP177 4.2 14.9 1.0
CD A:PRO11 4.4 29.0 1.0
C A:PRO11 4.4 29.8 1.0
C A:LEU10 4.5 27.2 1.0
O A:LEU10 4.5 22.1 1.0
N A:GLY12 4.5 28.2 1.0
O2B A:ADP177 4.5 21.2 1.0
CG A:PRO11 4.5 20.8 1.0
CD A:ARG117 4.5 48.7 1.0
OD2 A:ASP34 4.6 40.8 1.0
C A:GLY79 4.6 25.8 1.0
C4 A:SKM500 4.7 29.7 1.0
C8 A:SKM500 4.7 32.0 1.0
NH2 A:ARG117 4.8 30.2 1.0
CZ A:ARG117 4.9 31.1 1.0
O3 A:SKM500 4.9 30.2 1.0
CD A:LYS15 5.0 18.3 1.0

Reference:

M.V.Dias, L.M.Faim, I.B.Vasconcelos, J.S.De Oliveira, L.A.Basso, D.S.Santos, W.F.De Azevedo. Effects of the Magnesium and Chloride Ions and Shikimate on the Structure of Shikimate Kinase From Mycobacterium Tuberculosis Acta Crystallogr.,Sect.F V. 63 1 2007.
ISSN: ESSN 1744-3091
PubMed: 17183161
DOI: 10.1107/S1744309106046823
Page generated: Sat Dec 12 09:03:05 2020

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