Chlorine in PDB 2ekd: Structural Study of Project Id PH0250 From Pyrococcus Horikoshii OT3

The structure of Structural Study of Project Id PH0250 From Pyrococcus Horikoshii OT3, PDB code: 2ekd was solved by Y.Asada, N.Kunishima, Riken Structural Genomics/Proteomics Initiative(Rsgi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.94 / 2.30
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	93.471, 158.026, 163.347, 90.00, 90.00, 90.00
R / Rfree (%)	18.8 / 22.5

The binding sites of Chlorine atom in the Structural Study of Project Id PH0250 From Pyrococcus Horikoshii OT3 (pdb code 2ekd). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Structural Study of Project Id PH0250 From Pyrococcus Horikoshii OT3, PDB code: 2ekd:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in the Structural Study of Project Id PH0250 From Pyrococcus Horikoshii OT3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structural Study of Project Id PH0250 From Pyrococcus Horikoshii OT3 within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl1302 b:22.6 occ:0.50 N C:SER200 3.3 21.2 1.0 CA C:VAL199 3.7 19.6 1.0 CB C:VAL199 3.9 20.6 1.0 C C:VAL199 4.0 20.2 1.0 CE C:MSE1 4.0 82.8 1.0 CG1 C:VAL199 4.1 22.0 1.0 CA C:SER200 4.3 21.9 1.0 C C:SER200 4.3 23.3 1.0 O C:SER200 4.4 23.9 1.0 CB C:SER200 4.6 20.8 1.0 N C:MSE1 4.7 74.1 1.0 CB C:MSE1 4.7 76.2 1.0 O C:ILE198 4.7 22.1 1.0 N C:PRO201 4.9 25.6 1.0 N C:VAL199 5.0 20.8 1.0 CG C:MSE1 5.0 79.7 1.0

Chlorine binding site 2 out of 3 in the Structural Study of Project Id PH0250 From Pyrococcus Horikoshii OT3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structural Study of Project Id PH0250 From Pyrococcus Horikoshii OT3 within 5.0Å range: probe atom residue distance (Å) B Occ D:Cl1301 b:22.5 occ:1.00 N D:SER200 3.2 20.3 1.0 CA D:VAL199 3.6 19.2 1.0 CB D:VAL199 3.8 19.4 1.0 C D:VAL199 3.9 19.3 1.0 CE D:MSE1 4.0 74.4 1.0 CG1 D:VAL199 4.1 18.9 1.0 CA D:SER200 4.2 23.5 1.0 C D:SER200 4.3 24.3 1.0 O D:SER200 4.4 24.4 1.0 CB D:SER200 4.5 23.2 1.0 O D:ILE198 4.7 25.0 1.0 N D:PRO201 4.8 25.0 1.0 N D:VAL199 4.9 20.9 1.0

Chlorine binding site 3 out of 3 in the Structural Study of Project Id PH0250 From Pyrococcus Horikoshii OT3


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Structural Study of Project Id PH0250 From Pyrococcus Horikoshii OT3 within 5.0Å range: probe atom residue distance (Å) B Occ F:Cl1303 b:22.5 occ:0.50 N F:SER200 3.2 23.1 1.0 CA F:VAL199 3.6 21.5 1.0 CB F:VAL199 3.8 22.2 1.0 C F:VAL199 3.9 22.1 1.0 CG1 F:VAL199 4.1 22.7 1.0 CA F:SER200 4.3 22.9 1.0 CE F:MSE1 4.3 66.5 1.0 C F:SER200 4.4 24.3 1.0 CB F:SER200 4.5 22.1 1.0 O F:ILE198 4.6 23.1 1.0 O F:SER200 4.6 22.4 1.0 N F:VAL199 4.9 22.5 1.0 N F:PRO201 5.0 27.5 1.0

Y.Asada, N.Kunishima. Structural Study of Project Id PH0250 From Pyrococcus Horikoshii OT3 To Be Published.