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Chlorine in PDB 2ets: Crystal Structure of A Bacterial Domain of Unknown Function From DUF1798 Family (MW1337) From Staphylococcus Aureus Subsp. Aureus at 2.25 A Resolution

Protein crystallography data

The structure of Crystal Structure of A Bacterial Domain of Unknown Function From DUF1798 Family (MW1337) From Staphylococcus Aureus Subsp. Aureus at 2.25 A Resolution, PDB code: 2ets was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.29 / 2.25
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 93.473, 93.473, 101.164, 90.00, 90.00, 120.00
R / Rfree (%) 17.5 / 21.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Bacterial Domain of Unknown Function From DUF1798 Family (MW1337) From Staphylococcus Aureus Subsp. Aureus at 2.25 A Resolution (pdb code 2ets). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of A Bacterial Domain of Unknown Function From DUF1798 Family (MW1337) From Staphylococcus Aureus Subsp. Aureus at 2.25 A Resolution, PDB code: 2ets:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 2ets

Go back to Chlorine Binding Sites List in 2ets
Chlorine binding site 1 out of 3 in the Crystal Structure of A Bacterial Domain of Unknown Function From DUF1798 Family (MW1337) From Staphylococcus Aureus Subsp. Aureus at 2.25 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Bacterial Domain of Unknown Function From DUF1798 Family (MW1337) From Staphylococcus Aureus Subsp. Aureus at 2.25 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl118

b:63.5
occ:1.00
ND2 A:ASN63 3.1 40.8 1.0
NH2 A:ARG65 3.1 49.4 1.0
CL A:CL119 3.6 65.0 1.0
NE A:ARG65 3.6 56.6 1.0
CZ A:ARG65 3.8 57.1 1.0
CG A:ASN63 4.0 48.4 1.0
CG A:LYS66 4.1 64.6 1.0
OD1 A:ASN63 4.1 53.3 1.0
CD A:LYS66 4.7 82.4 1.0
CB A:ARG65 4.8 47.8 1.0
CD A:ARG65 4.8 53.7 1.0

Chlorine binding site 2 out of 3 in 2ets

Go back to Chlorine Binding Sites List in 2ets
Chlorine binding site 2 out of 3 in the Crystal Structure of A Bacterial Domain of Unknown Function From DUF1798 Family (MW1337) From Staphylococcus Aureus Subsp. Aureus at 2.25 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Bacterial Domain of Unknown Function From DUF1798 Family (MW1337) From Staphylococcus Aureus Subsp. Aureus at 2.25 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl119

b:65.0
occ:1.00
O A:HOH124 3.0 38.9 1.0
CL A:CL118 3.6 63.5 1.0
NE A:ARG65 3.7 56.6 1.0
CB A:ARG65 3.8 47.8 1.0
CD A:ARG65 3.9 53.7 1.0
ND2 A:ASN63 4.2 40.8 1.0
OD1 A:ASN63 4.3 53.3 1.0
CG A:ASN63 4.4 48.4 1.0
CG A:ARG65 4.5 51.9 1.0
CZ A:ARG65 4.9 57.1 1.0

Chlorine binding site 3 out of 3 in 2ets

Go back to Chlorine Binding Sites List in 2ets
Chlorine binding site 3 out of 3 in the Crystal Structure of A Bacterial Domain of Unknown Function From DUF1798 Family (MW1337) From Staphylococcus Aureus Subsp. Aureus at 2.25 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of A Bacterial Domain of Unknown Function From DUF1798 Family (MW1337) From Staphylococcus Aureus Subsp. Aureus at 2.25 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl120

b:82.7
occ:1.00
O A:HOH162 2.9 61.0 1.0
CB A:GLN99 3.2 46.5 1.0
OE1 A:GLN103 3.6 49.4 1.0
CA A:GLN99 3.6 49.8 1.0
O A:GLN99 3.7 47.5 1.0
CG A:GLN99 3.7 51.6 1.0
CG2 A:ILE9 3.8 49.4 1.0
CG A:GLN103 4.0 51.2 1.0
C A:GLN99 4.0 49.1 1.0
CG1 A:ILE9 4.1 49.8 1.0
CD A:GLN103 4.3 59.8 1.0
CD A:GLN99 4.3 56.8 1.0
CD1 A:ILE9 4.3 54.7 1.0
NE2 A:GLN99 4.4 58.9 1.0
CB A:ILE9 4.5 51.8 1.0
CB A:LEU102 4.8 50.5 1.0

Reference:

P.Kozbial, Q.Xu, H.J.Chiu, D.Mcmullan, S.S.Krishna, M.D.Miller, P.Abdubek, C.Acosta, T.Astakhova, H.L.Axelrod, D.Carlton, T.Clayton, M.Deller, L.Duan, Y.Elias, M.A.Elsliger, J.Feuerhelm, S.K.Grzechnik, J.Hale, G.W.Han, L.Jaroszewski, K.K.Jin, H.E.Klock, M.W.Knuth, E.Koesema, A.Kumar, D.Marciano, A.T.Morse, K.D.Murphy, E.Nigoghossian, L.Okach, S.Oommachen, R.Reyes, C.L.Rife, G.Spraggon, C.V.Trout, H.Van Den Bedem, D.Weekes, A.White, G.Wolf, C.Zubieta, K.O.Hodgson, J.Wooley, A.M.Deacon, A.Godzik, S.A.Lesley, I.A.Wilson. Crystal Structures of MW1337R and LIN2004: Representatives of A Novel Protein Family That Adopt A Four-Helical Bundle Fold. Proteins V. 71 1589 2008.
ISSN: ISSN 0887-3585
PubMed: 18324683
DOI: 10.1002/PROT.22020
Page generated: Sat Jul 20 06:51:52 2024

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