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Chlorine in PDB 2f34: Crystal Structure of the GLUR5 Ligand Binding Core Dimer with UBP310 at 1.74 Angstroms Resolution

Protein crystallography data

The structure of Crystal Structure of the GLUR5 Ligand Binding Core Dimer with UBP310 at 1.74 Angstroms Resolution, PDB code: 2f34 was solved by M.L.Mayer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.41 / 1.74
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 97.698, 97.954, 129.126, 90.00, 90.00, 90.00
R / Rfree (%) 18.1 / 21.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the GLUR5 Ligand Binding Core Dimer with UBP310 at 1.74 Angstroms Resolution (pdb code 2f34). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of the GLUR5 Ligand Binding Core Dimer with UBP310 at 1.74 Angstroms Resolution, PDB code: 2f34:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2f34

Go back to Chlorine Binding Sites List in 2f34
Chlorine binding site 1 out of 2 in the Crystal Structure of the GLUR5 Ligand Binding Core Dimer with UBP310 at 1.74 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the GLUR5 Ligand Binding Core Dimer with UBP310 at 1.74 Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl501

b:23.6
occ:0.50
O A:HOH810 2.8 23.9 1.0
NH1 A:ARG227 3.4 16.7 1.0
NZ A:LYS103 3.7 11.6 1.0
CG A:LYS103 4.0 10.4 1.0
CE A:LYS103 4.1 12.6 1.0
O A:PHE101 4.2 13.1 1.0
CD A:ARG227 4.4 15.1 1.0
OD1 A:ASP228 4.4 17.3 1.0
CZ A:ARG227 4.6 17.3 1.0
CD A:LYS103 4.7 11.4 1.0
OG1 A:THR231 4.8 14.0 1.0
N A:LYS103 4.8 13.3 1.0
NE A:ARG227 5.0 15.3 1.0

Chlorine binding site 2 out of 2 in 2f34

Go back to Chlorine Binding Sites List in 2f34
Chlorine binding site 2 out of 2 in the Crystal Structure of the GLUR5 Ligand Binding Core Dimer with UBP310 at 1.74 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the GLUR5 Ligand Binding Core Dimer with UBP310 at 1.74 Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl502

b:23.2
occ:0.50
O B:HOH818 2.8 22.9 1.0
NH1 B:ARG227 3.3 16.2 1.0
NZ B:LYS103 3.7 11.8 1.0
CG B:LYS103 4.1 11.1 1.0
CE B:LYS103 4.2 13.7 1.0
O B:PHE101 4.2 13.9 1.0
CD B:ARG227 4.4 14.6 1.0
OD1 B:ASP228 4.4 17.5 1.0
CZ B:ARG227 4.6 16.8 1.0
CD B:LYS103 4.8 11.4 1.0
OG1 B:THR231 4.8 14.8 1.0
N B:LYS103 4.8 13.3 1.0
NE B:ARG227 5.0 15.5 1.0
O B:HOH812 5.0 17.0 1.0

Reference:

M.L.Mayer, A.Ghosal, N.P.Dolman, D.E.Jane. Crystal Structures of the Kainate Receptor GLUR5 Ligand Binding Core Dimer with Novel GLUR5-Selective Antagonists. J.Neurosci. V. 26 2852 2006.
ISSN: ISSN 0270-6474
PubMed: 16540562
DOI: 10.1523/JNEUROSCI.0123-06.2005
Page generated: Sat Jul 20 06:54:27 2024

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