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Chlorine in PDB 2f6w: Protein Tyrosine Phosphatase 1B with Sulfamic Acid Inhibitors

Enzymatic activity of Protein Tyrosine Phosphatase 1B with Sulfamic Acid Inhibitors

All present enzymatic activity of Protein Tyrosine Phosphatase 1B with Sulfamic Acid Inhibitors:
3.1.3.48;

Protein crystallography data

The structure of Protein Tyrosine Phosphatase 1B with Sulfamic Acid Inhibitors, PDB code: 2f6w was solved by A.G.Evdokimov, M.E.Pokross, S.R.Klopfenstein, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.70 / 2.20
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 88.005, 88.005, 103.701, 90.00, 90.00, 120.00
R / Rfree (%) 16.1 / 23.1

Other elements in 2f6w:

The structure of Protein Tyrosine Phosphatase 1B with Sulfamic Acid Inhibitors also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Protein Tyrosine Phosphatase 1B with Sulfamic Acid Inhibitors (pdb code 2f6w). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the Protein Tyrosine Phosphatase 1B with Sulfamic Acid Inhibitors, PDB code: 2f6w:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;

Chlorine binding site 1 out of 5 in 2f6w

Go back to Chlorine Binding Sites List in 2f6w
Chlorine binding site 1 out of 5 in the Protein Tyrosine Phosphatase 1B with Sulfamic Acid Inhibitors


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Protein Tyrosine Phosphatase 1B with Sulfamic Acid Inhibitors within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl603

b:26.2
occ:1.00
 NH2 A:ARG45 3.1 24.5 1.0
NH1 A:ARG45 3.4 22.1 1.0
N A:ALA122 3.5 20.8 1.0
CD A:PRO89 3.6 21.4 1.0
C A:CYS121 3.7 21.1 1.0
CZ A:ARG45 3.8 21.1 1.0
CA A:ALA122 3.9 19.4 1.0
O A:CYS121 4.0 22.9 1.0
O A:LEU119 4.2 19.1 1.0
CG A:PRO89 4.2 23.0 1.0
N A:CYS121 4.2 18.7 1.0
CA A:CYS121 4.2 19.2 1.0
O A:PRO87 4.3 20.6 1.0
CB A:ALA122 4.3 18.1 1.0
CA A:LEU88 4.4 20.5 1.0
N A:PRO89 4.4 21.3 1.0
CB A:LEU119 4.5 20.9 1.0
CD2 A:LEU88 4.5 12.2 1.0
C A:LEU119 4.5 20.4 1.0
C A:LEU88 4.8 20.0 1.0
C A:LYS120 4.9 17.7 1.0

Chlorine binding site 2 out of 5 in 2f6w

Go back to Chlorine Binding Sites List in 2f6w
Chlorine binding site 2 out of 5 in the Protein Tyrosine Phosphatase 1B with Sulfamic Acid Inhibitors


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Protein Tyrosine Phosphatase 1B with Sulfamic Acid Inhibitors within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl604

b:46.4
occ:1.00
 NE A:ARG24 3.0 31.4 1.0
O A:HOH838 3.0 42.8 1.0
NH1 A:ARG254 3.1 20.9 1.0
NH2 A:ARG254 3.2 15.1 1.0
O A:HOH700 3.5 25.0 1.0
NE2 A:GLN262 3.6 18.3 1.0
CZ A:ARG254 3.6 21.1 1.0
CD A:ARG24 3.7 26.8 1.0
OH A:TYR20 3.7 19.9 1.0
CA A:GLY259 3.7 20.7 1.0
CG A:ARG24 3.8 25.1 1.0
CZ A:ARG24 4.0 41.1 1.0
NH2 A:ARG24 4.1 40.2 1.0
O A:GLY259 4.3 21.5 1.0
C A:GLY259 4.3 21.1 1.0
O A:ILE261 4.4 18.1 1.0
O A:HOH922 4.7 41.8 1.0
CZ A:TYR20 4.7 23.4 1.0
N A:GLY259 4.7 19.3 1.0
CD A:GLN262 4.7 23.9 1.0
CB A:ARG24 4.8 25.1 1.0
O A:HOH802 4.8 31.0 1.0
O A:HOH636 4.9 9.8 1.0
NE A:ARG254 4.9 19.3 1.0

Chlorine binding site 3 out of 5 in 2f6w

Go back to Chlorine Binding Sites List in 2f6w
Chlorine binding site 3 out of 5 in the Protein Tyrosine Phosphatase 1B with Sulfamic Acid Inhibitors


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Protein Tyrosine Phosphatase 1B with Sulfamic Acid Inhibitors within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl605

b:33.8
occ:1.00
 N A:ASP181 3.2 20.1 1.0
CA A:PRO180 3.6 22.4 1.0
CB A:ASP181 3.7 20.7 1.0
CB A:GLU115 3.8 21.6 1.0
C A:PRO180 4.0 22.1 1.0
CB A:PRO180 4.0 23.0 1.0
CA A:ASP181 4.1 21.0 1.0
O A:HOH688 4.1 36.0 1.0
CG A:LYS116 4.2 28.5 1.0
CD A:GLU115 4.2 23.2 1.0
NH1 A:ARG112 4.2 37.9 1.0
CE A:LYS116 4.3 37.3 1.0
OE2 A:GLU115 4.3 20.3 1.0
CG A:GLU115 4.4 23.5 1.0
OE1 A:GLU115 4.5 26.0 1.0
O A:HOH763 4.5 36.4 1.0
O A:HOH779 4.5 42.5 1.0
CD A:LYS116 4.6 29.0 1.0
CA A:GLU115 4.7 22.6 1.0
O A:ASP181 4.7 20.1 1.0
N A:LYS116 4.9 23.0 1.0
N A:PRO180 4.9 23.1 1.0
C A:ASP181 5.0 21.1 1.0
O A:TRP179 5.0 23.1 1.0

Chlorine binding site 4 out of 5 in 2f6w

Go back to Chlorine Binding Sites List in 2f6w
Chlorine binding site 4 out of 5 in the Protein Tyrosine Phosphatase 1B with Sulfamic Acid Inhibitors


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Protein Tyrosine Phosphatase 1B with Sulfamic Acid Inhibitors within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl606

b:33.0
occ:1.00
 O A:HOH660 2.9 16.0 1.0
O A:HOH847 3.2 41.1 1.0
O A:HOH666 3.2 19.0 1.0
N A:VAL113 3.3 20.2 1.0
CE1 A:HIS175 3.4 16.7 1.0
CG2 A:VAL113 3.6 21.8 0.5
CA A:ARG112 3.7 21.5 1.0
CB A:ARG112 3.9 21.2 1.0
CB A:VAL113 4.0 19.4 0.5
CG1 A:VAL113 4.0 16.4 0.5
NE2 A:HIS175 4.0 15.4 1.0
CG A:ARG112 4.0 24.3 1.0
C A:ARG112 4.0 21.5 1.0
CG2 A:VAL113 4.0 15.3 0.5
CB A:VAL113 4.1 21.0 0.5
CA A:VAL113 4.2 18.9 0.5
CA A:VAL113 4.3 20.1 0.5
O A:HOH681 4.3 31.4 1.0
ND1 A:HIS175 4.6 18.2 1.0
CH2 A:TRP125 4.6 19.6 1.0
O A:HOH762 4.7 34.8 1.0
O A:ASN111 4.8 22.0 1.0
CD A:ARG112 4.9 33.1 1.0
CE A:MET109 4.9 12.2 1.0

Chlorine binding site 5 out of 5 in 2f6w

Go back to Chlorine Binding Sites List in 2f6w
Chlorine binding site 5 out of 5 in the Protein Tyrosine Phosphatase 1B with Sulfamic Acid Inhibitors


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Protein Tyrosine Phosphatase 1B with Sulfamic Acid Inhibitors within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl607

b:32.7
occ:1.00
 N A:GLY117 3.1 22.4 1.0
O A:HOH763 3.4 36.4 1.0
N A:LYS116 3.6 23.0 1.0
CA A:GLY117 3.9 23.0 1.0
C A:LYS116 4.0 24.2 1.0
CG A:MET114 4.0 23.2 1.0
CA A:LYS116 4.0 24.5 1.0
C A:GLU115 4.2 22.4 1.0
SD A:MET114 4.3 27.4 1.0
CA A:GLU115 4.6 22.6 1.0
O A:MET114 4.7 22.9 1.0
C A:MET114 4.9 21.9 1.0
N A:GLU115 4.9 22.1 1.0
O A:GLU115 5.0 20.4 1.0

Reference:

S.R.Klopfenstein, A.G.Evdokimov, A.-O.Colson, N.T.Fairweather, J.J.Neuman, M.B.Maier, J.L.Gray, G.S.Gerwe, G.E.Stake, B.W.Howard, J.A.Farmer, M.E.Pokross, T.R.Downs, B.Kasibhatla, K.G.Peters. 1,2,3,4-Tetrahydroisoquinolinyl Sulfamic Acids As Phosphatase PTP1B Inhibitors Bioorg.Med.Chem.Lett. V. 16 1574 2006.
ISSN: ISSN 0960-894X
PubMed: 16386905
DOI: 10.1016/J.BMCL.2005.12.051
Page generated: Sat Jul 20 06:57:33 2024

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