Chlorine in PDB 2fie: Structure of Human Liver Fbpase Complexed with Potent Benzoxazole Allosteric Inhibitors
Enzymatic activity of Structure of Human Liver Fbpase Complexed with Potent Benzoxazole Allosteric Inhibitors
All present enzymatic activity of Structure of Human Liver Fbpase Complexed with Potent Benzoxazole Allosteric Inhibitors:
3.1.3.11;
Protein crystallography data
The structure of Structure of Human Liver Fbpase Complexed with Potent Benzoxazole Allosteric Inhibitors, PDB code: 2fie
was solved by
C.Abad-Zapatero,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
19.95 /
2.81
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
67.369,
83.327,
277.556,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
n/a /
n/a
|
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Structure of Human Liver Fbpase Complexed with Potent Benzoxazole Allosteric Inhibitors
(pdb code 2fie). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 8 binding sites of Chlorine where determined in the
Structure of Human Liver Fbpase Complexed with Potent Benzoxazole Allosteric Inhibitors, PDB code: 2fie:
Jump to Chlorine binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
Chlorine binding site 1 out
of 8 in 2fie
Go back to
Chlorine Binding Sites List in 2fie
Chlorine binding site 1 out
of 8 in the Structure of Human Liver Fbpase Complexed with Potent Benzoxazole Allosteric Inhibitors
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Structure of Human Liver Fbpase Complexed with Potent Benzoxazole Allosteric Inhibitors within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl701
b:21.5
occ:1.00
|
CL2
|
A:A74701
|
0.0
|
21.5
|
1.0
|
C2
|
A:A74701
|
1.7
|
21.5
|
1.0
|
C1
|
A:A74701
|
2.7
|
21.5
|
1.0
|
C3
|
A:A74701
|
2.7
|
21.5
|
1.0
|
CE
|
A:MET177
|
3.6
|
46.6
|
1.0
|
CG1
|
A:VAL17
|
3.7
|
31.3
|
1.0
|
O
|
A:VAL17
|
3.7
|
39.2
|
1.0
|
CD1
|
A:LEU34
|
3.7
|
19.3
|
1.0
|
CB
|
A:GLU20
|
3.8
|
74.5
|
1.0
|
C
|
A:A74701
|
4.1
|
21.5
|
1.0
|
CD2
|
A:LEU30
|
4.1
|
14.3
|
1.0
|
C4
|
A:A74701
|
4.1
|
21.5
|
1.0
|
N
|
A:GLY21
|
4.1
|
39.2
|
1.0
|
SD
|
A:MET177
|
4.3
|
47.6
|
1.0
|
CG
|
A:LEU30
|
4.3
|
27.2
|
1.0
|
CA
|
A:VAL17
|
4.4
|
27.7
|
1.0
|
OG1
|
A:THR31
|
4.4
|
32.8
|
1.0
|
C
|
A:VAL17
|
4.4
|
36.2
|
1.0
|
CB
|
A:VAL17
|
4.5
|
29.9
|
1.0
|
CA
|
A:GLY21
|
4.5
|
41.9
|
1.0
|
C
|
A:GLU20
|
4.6
|
47.8
|
1.0
|
C5
|
A:A74701
|
4.6
|
21.5
|
1.0
|
CG2
|
A:VAL17
|
4.7
|
27.3
|
1.0
|
CA
|
A:GLU20
|
4.8
|
46.3
|
1.0
|
CG
|
A:GLU20
|
4.8
|
80.1
|
1.0
|
CA
|
A:THR31
|
5.0
|
31.4
|
1.0
|
|
Chlorine binding site 2 out
of 8 in 2fie
Go back to
Chlorine Binding Sites List in 2fie
Chlorine binding site 2 out
of 8 in the Structure of Human Liver Fbpase Complexed with Potent Benzoxazole Allosteric Inhibitors
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Structure of Human Liver Fbpase Complexed with Potent Benzoxazole Allosteric Inhibitors within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl701
b:21.5
occ:1.00
|
CL1
|
A:A74701
|
0.0
|
21.5
|
1.0
|
C5
|
A:A74701
|
1.7
|
21.5
|
1.0
|
C
|
A:A74701
|
2.7
|
21.5
|
1.0
|
C4
|
A:A74701
|
2.8
|
21.5
|
1.0
|
O2
|
A:A74701
|
3.2
|
21.5
|
1.0
|
S
|
A:A74701
|
3.4
|
21.5
|
1.0
|
CB
|
A:ALA24
|
3.5
|
8.8
|
1.0
|
N
|
A:A74701
|
3.6
|
21.5
|
1.0
|
CA
|
A:GLY26
|
3.6
|
44.4
|
1.0
|
N
|
A:GLY26
|
3.7
|
49.6
|
1.0
|
O
|
A:HOH554
|
4.0
|
52.9
|
1.0
|
C1
|
A:A74701
|
4.1
|
21.5
|
1.0
|
C3
|
A:A74701
|
4.1
|
21.5
|
1.0
|
C2
|
A:A74701
|
4.6
|
21.5
|
1.0
|
C
|
A:ALA24
|
4.6
|
35.6
|
1.0
|
CA
|
A:ALA24
|
4.7
|
31.6
|
1.0
|
C6
|
A:A74701
|
4.7
|
21.5
|
1.0
|
C
|
A:ARG25
|
4.8
|
27.4
|
1.0
|
O1
|
A:A74701
|
4.8
|
21.5
|
1.0
|
O
|
A:ALA24
|
4.9
|
32.7
|
1.0
|
N
|
A:ARG25
|
4.9
|
22.9
|
1.0
|
C
|
A:GLY26
|
4.9
|
44.5
|
1.0
|
|
Chlorine binding site 3 out
of 8 in 2fie
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Chlorine Binding Sites List in 2fie
Chlorine binding site 3 out
of 8 in the Structure of Human Liver Fbpase Complexed with Potent Benzoxazole Allosteric Inhibitors
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Structure of Human Liver Fbpase Complexed with Potent Benzoxazole Allosteric Inhibitors within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Cl801
b:21.5
occ:1.00
|
CL2
|
D:A74801
|
0.0
|
21.5
|
1.0
|
C2
|
D:A74801
|
1.7
|
21.5
|
1.0
|
C1
|
D:A74801
|
2.7
|
21.5
|
1.0
|
C3
|
D:A74801
|
2.8
|
21.5
|
1.0
|
CG1
|
D:VAL17
|
3.4
|
20.0
|
1.0
|
O
|
D:VAL17
|
3.5
|
21.8
|
1.0
|
CE
|
D:MET177
|
3.7
|
40.7
|
1.0
|
CB
|
D:GLU20
|
3.8
|
57.3
|
1.0
|
C
|
D:A74801
|
4.0
|
21.5
|
1.0
|
CD1
|
D:LEU34
|
4.1
|
11.9
|
1.0
|
C4
|
D:A74801
|
4.1
|
21.5
|
1.0
|
N
|
D:GLY21
|
4.3
|
44.0
|
1.0
|
C
|
D:VAL17
|
4.3
|
30.0
|
1.0
|
CA
|
D:VAL17
|
4.3
|
31.2
|
1.0
|
CB
|
D:VAL17
|
4.4
|
22.1
|
1.0
|
OG1
|
D:THR31
|
4.4
|
39.7
|
1.0
|
CD2
|
D:LEU30
|
4.4
|
18.8
|
1.0
|
SD
|
D:MET177
|
4.5
|
35.4
|
1.0
|
C5
|
D:A74801
|
4.6
|
21.5
|
1.0
|
CG
|
D:LEU30
|
4.6
|
35.2
|
1.0
|
C
|
D:GLU20
|
4.7
|
57.3
|
1.0
|
CG
|
D:GLU20
|
4.7
|
62.9
|
1.0
|
CA
|
D:GLY21
|
4.8
|
42.8
|
1.0
|
CA
|
D:GLU20
|
4.8
|
58.3
|
1.0
|
CA
|
D:THR31
|
4.9
|
31.2
|
1.0
|
CG2
|
D:VAL17
|
4.9
|
26.2
|
1.0
|
|
Chlorine binding site 4 out
of 8 in 2fie
Go back to
Chlorine Binding Sites List in 2fie
Chlorine binding site 4 out
of 8 in the Structure of Human Liver Fbpase Complexed with Potent Benzoxazole Allosteric Inhibitors
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 4 of Structure of Human Liver Fbpase Complexed with Potent Benzoxazole Allosteric Inhibitors within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Cl801
b:21.5
occ:1.00
|
CL1
|
D:A74801
|
0.0
|
21.5
|
1.0
|
C5
|
D:A74801
|
1.8
|
21.5
|
1.0
|
C
|
D:A74801
|
2.7
|
21.5
|
1.0
|
C4
|
D:A74801
|
2.8
|
21.5
|
1.0
|
CB
|
D:ALA24
|
3.1
|
36.8
|
1.0
|
O2
|
D:A74801
|
3.1
|
21.5
|
1.0
|
S
|
D:A74801
|
3.3
|
21.5
|
1.0
|
N
|
D:A74801
|
3.4
|
21.5
|
1.0
|
CA
|
D:GLY26
|
3.9
|
47.7
|
1.0
|
N
|
D:GLY26
|
4.0
|
48.1
|
1.0
|
C1
|
D:A74801
|
4.1
|
21.5
|
1.0
|
C3
|
D:A74801
|
4.1
|
21.5
|
1.0
|
C
|
D:ALA24
|
4.3
|
52.0
|
1.0
|
O
|
D:ALA24
|
4.3
|
55.7
|
1.0
|
CA
|
D:ALA24
|
4.3
|
52.7
|
1.0
|
C2
|
D:A74801
|
4.6
|
21.5
|
1.0
|
C6
|
D:A74801
|
4.6
|
21.5
|
1.0
|
O1
|
D:A74801
|
4.7
|
21.5
|
1.0
|
C
|
D:ARG25
|
4.8
|
58.7
|
1.0
|
N
|
D:ARG25
|
4.9
|
57.7
|
1.0
|
O
|
D:GLY21
|
4.9
|
37.0
|
1.0
|
|
Chlorine binding site 5 out
of 8 in 2fie
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Chlorine Binding Sites List in 2fie
Chlorine binding site 5 out
of 8 in the Structure of Human Liver Fbpase Complexed with Potent Benzoxazole Allosteric Inhibitors
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 5 of Structure of Human Liver Fbpase Complexed with Potent Benzoxazole Allosteric Inhibitors within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Cl901
b:21.5
occ:1.00
|
CL2
|
H:A74901
|
0.0
|
21.5
|
1.0
|
C2
|
H:A74901
|
1.7
|
21.5
|
1.0
|
C1
|
H:A74901
|
2.7
|
21.5
|
1.0
|
C3
|
H:A74901
|
2.7
|
21.5
|
1.0
|
CG1
|
H:VAL17
|
3.6
|
25.3
|
1.0
|
O
|
H:VAL17
|
3.7
|
11.6
|
1.0
|
CE
|
H:MET177
|
3.9
|
42.9
|
1.0
|
CB
|
H:GLU20
|
4.0
|
67.9
|
1.0
|
C
|
H:A74901
|
4.0
|
21.5
|
1.0
|
SD
|
H:MET177
|
4.1
|
47.6
|
1.0
|
C4
|
H:A74901
|
4.1
|
21.5
|
1.0
|
CD1
|
H:LEU34
|
4.1
|
12.2
|
1.0
|
OG1
|
H:THR31
|
4.2
|
38.3
|
1.0
|
CA
|
H:VAL17
|
4.3
|
12.8
|
1.0
|
C
|
H:VAL17
|
4.3
|
12.8
|
1.0
|
CD2
|
H:LEU30
|
4.4
|
4.8
|
1.0
|
N
|
H:GLY21
|
4.4
|
26.3
|
1.0
|
CB
|
H:VAL17
|
4.4
|
26.1
|
1.0
|
C5
|
H:A74901
|
4.6
|
21.5
|
1.0
|
CG2
|
H:VAL17
|
4.6
|
26.8
|
1.0
|
CG
|
H:LEU30
|
4.7
|
20.2
|
1.0
|
C
|
H:GLU20
|
4.7
|
37.1
|
1.0
|
CA
|
H:GLY21
|
4.8
|
33.6
|
1.0
|
CA
|
H:THR31
|
4.9
|
31.4
|
1.0
|
CA
|
H:GLU20
|
5.0
|
43.5
|
1.0
|
N
|
H:THR31
|
5.0
|
33.2
|
1.0
|
|
Chlorine binding site 6 out
of 8 in 2fie
Go back to
Chlorine Binding Sites List in 2fie
Chlorine binding site 6 out
of 8 in the Structure of Human Liver Fbpase Complexed with Potent Benzoxazole Allosteric Inhibitors
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 6 of Structure of Human Liver Fbpase Complexed with Potent Benzoxazole Allosteric Inhibitors within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Cl901
b:21.5
occ:1.00
|
CL1
|
H:A74901
|
0.0
|
21.5
|
1.0
|
C5
|
H:A74901
|
1.8
|
21.5
|
1.0
|
C
|
H:A74901
|
2.7
|
21.5
|
1.0
|
C4
|
H:A74901
|
2.8
|
21.5
|
1.0
|
CB
|
H:ALA24
|
3.2
|
0.6
|
1.0
|
O2
|
H:A74901
|
3.3
|
21.5
|
1.0
|
S
|
H:A74901
|
3.4
|
21.5
|
1.0
|
N
|
H:A74901
|
3.7
|
21.5
|
1.0
|
CA
|
H:GLY26
|
4.0
|
56.6
|
1.0
|
C1
|
H:A74901
|
4.1
|
21.5
|
1.0
|
C3
|
H:A74901
|
4.1
|
21.5
|
1.0
|
N
|
H:GLY26
|
4.1
|
59.7
|
1.0
|
O
|
H:ALA24
|
4.3
|
35.3
|
1.0
|
CA
|
H:ALA24
|
4.4
|
35.8
|
1.0
|
C
|
H:ALA24
|
4.4
|
33.8
|
1.0
|
C2
|
H:A74901
|
4.6
|
21.5
|
1.0
|
O1
|
H:A74901
|
4.8
|
21.5
|
1.0
|
C6
|
H:A74901
|
4.9
|
21.5
|
1.0
|
|
Chlorine binding site 7 out
of 8 in 2fie
Go back to
Chlorine Binding Sites List in 2fie
Chlorine binding site 7 out
of 8 in the Structure of Human Liver Fbpase Complexed with Potent Benzoxazole Allosteric Inhibitors
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 7 of Structure of Human Liver Fbpase Complexed with Potent Benzoxazole Allosteric Inhibitors within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
L:Cl1001
b:21.5
occ:1.00
|
CL2
|
L:A741001
|
0.0
|
21.5
|
1.0
|
C2
|
L:A741001
|
1.7
|
21.5
|
1.0
|
C3
|
L:A741001
|
2.7
|
21.5
|
1.0
|
C1
|
L:A741001
|
2.7
|
21.5
|
1.0
|
CE
|
L:MET177
|
3.5
|
31.7
|
1.0
|
CG1
|
L:VAL17
|
3.5
|
37.9
|
1.0
|
O
|
L:VAL17
|
3.6
|
50.1
|
1.0
|
CD1
|
L:LEU34
|
3.9
|
17.4
|
1.0
|
CB
|
L:GLU20
|
4.0
|
32.9
|
1.0
|
C4
|
L:A741001
|
4.0
|
21.5
|
1.0
|
C
|
L:A741001
|
4.0
|
21.5
|
1.0
|
CA
|
L:VAL17
|
4.1
|
51.7
|
1.0
|
CD2
|
L:LEU30
|
4.1
|
35.6
|
1.0
|
CB
|
L:VAL17
|
4.1
|
43.8
|
1.0
|
CG2
|
L:VAL17
|
4.1
|
36.4
|
1.0
|
SD
|
L:MET177
|
4.2
|
33.5
|
1.0
|
C
|
L:VAL17
|
4.3
|
50.1
|
1.0
|
OG1
|
L:THR31
|
4.3
|
27.2
|
1.0
|
N
|
L:GLY21
|
4.5
|
31.8
|
1.0
|
CG
|
L:LEU30
|
4.5
|
49.2
|
1.0
|
C5
|
L:A741001
|
4.6
|
21.5
|
1.0
|
C
|
L:GLU20
|
4.9
|
42.6
|
1.0
|
CA
|
L:GLY21
|
4.9
|
38.5
|
1.0
|
CG
|
L:GLU20
|
4.9
|
39.0
|
1.0
|
CA
|
L:THR31
|
5.0
|
23.2
|
1.0
|
|
Chlorine binding site 8 out
of 8 in 2fie
Go back to
Chlorine Binding Sites List in 2fie
Chlorine binding site 8 out
of 8 in the Structure of Human Liver Fbpase Complexed with Potent Benzoxazole Allosteric Inhibitors
Mono view
Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 8 of Structure of Human Liver Fbpase Complexed with Potent Benzoxazole Allosteric Inhibitors within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
L:Cl1001
b:21.5
occ:1.00
|
CL1
|
L:A741001
|
0.0
|
21.5
|
1.0
|
C5
|
L:A741001
|
1.7
|
21.5
|
1.0
|
C
|
L:A741001
|
2.7
|
21.5
|
1.0
|
C4
|
L:A741001
|
2.8
|
21.5
|
1.0
|
CB
|
L:ALA24
|
3.1
|
20.9
|
1.0
|
O2
|
L:A741001
|
3.2
|
21.5
|
1.0
|
S
|
L:A741001
|
3.3
|
21.5
|
1.0
|
N
|
L:A741001
|
3.4
|
21.5
|
1.0
|
CA
|
L:GLY26
|
3.7
|
27.7
|
1.0
|
N
|
L:GLY26
|
3.8
|
27.3
|
1.0
|
C1
|
L:A741001
|
4.0
|
21.5
|
1.0
|
C3
|
L:A741001
|
4.1
|
21.5
|
1.0
|
C
|
L:ALA24
|
4.2
|
47.9
|
1.0
|
O
|
L:ALA24
|
4.2
|
52.0
|
1.0
|
CA
|
L:ALA24
|
4.2
|
47.9
|
1.0
|
C6
|
L:A741001
|
4.5
|
21.5
|
1.0
|
O
|
L:GLY21
|
4.6
|
41.7
|
1.0
|
C2
|
L:A741001
|
4.6
|
21.5
|
1.0
|
O1
|
L:A741001
|
4.7
|
21.5
|
1.0
|
N
|
L:ARG25
|
4.8
|
34.7
|
1.0
|
C
|
L:ARG25
|
4.8
|
43.3
|
1.0
|
CA
|
L:GLY21
|
5.0
|
38.5
|
1.0
|
N
|
L:ALA24
|
5.0
|
48.2
|
1.0
|
C
|
L:GLY26
|
5.0
|
29.1
|
1.0
|
|
Reference:
C.Lai,
R.J.Gum,
M.Daly,
E.H.Fry,
C.Hutchins,
C.Abad-Zapatero,
T.W.Von Geldern.
Benzoxazole Benzenesulfonamides As Allosteric Inhibitors of Fructose-1,6-Bisphosphatase. Bioorg.Med.Chem.Lett. V. 16 1807 2006.
ISSN: ISSN 0960-894X
PubMed: 16446092
DOI: 10.1016/J.BMCL.2006.01.014
Page generated: Sat Jul 20 07:04:38 2024
|