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Chlorine in PDB 2g9z: Thiamin Pyrophosphokinase From Candida Albicans

Enzymatic activity of Thiamin Pyrophosphokinase From Candida Albicans

All present enzymatic activity of Thiamin Pyrophosphokinase From Candida Albicans:
2.7.6.2;

Protein crystallography data

The structure of Thiamin Pyrophosphokinase From Candida Albicans, PDB code: 2g9z was solved by C.Abergel, S.Santini, V.Monchois, T.Rousselle, J.M.Claverie, Bacterialtargets At Igs-Cnrs, France (Bigs), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.44 / 1.96
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 50.825, 60.331, 63.722, 66.14, 89.94, 65.07
R / Rfree (%) 18.7 / 23.6

Other elements in 2g9z:

The structure of Thiamin Pyrophosphokinase From Candida Albicans also contains other interesting chemical elements:

Magnesium (Mg) 6 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Thiamin Pyrophosphokinase From Candida Albicans (pdb code 2g9z). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Thiamin Pyrophosphokinase From Candida Albicans, PDB code: 2g9z:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2g9z

Go back to Chlorine Binding Sites List in 2g9z
Chlorine binding site 1 out of 2 in the Thiamin Pyrophosphokinase From Candida Albicans


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Thiamin Pyrophosphokinase From Candida Albicans within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl705

b:31.3
occ:1.00
NE A:ARG250 3.2 19.0 1.0
O A:HOH968 3.3 36.8 1.0
N A:ARG250 3.4 24.9 1.0
NH2 A:ARG250 3.6 18.9 1.0
CB A:ARG250 3.8 23.8 1.0
O A:GLU307 3.8 20.5 1.0
CB A:ASN249 3.8 28.2 1.0
CB A:GLU307 3.9 21.7 1.0
CZ A:ARG250 3.9 18.2 1.0
CA A:GLU307 4.0 20.0 1.0
CG A:ARG250 4.1 21.8 1.0
CA A:ARG250 4.1 25.0 1.0
CG A:GLU307 4.2 19.3 1.0
CD A:ARG250 4.2 20.4 1.0
OE2 A:GLU307 4.3 20.1 1.0
CA A:ASN249 4.3 27.3 1.0
C A:ASN249 4.3 25.7 1.0
C A:GLU307 4.3 19.4 1.0
CD A:GLU307 4.4 21.0 1.0
N A:LEU251 4.5 25.9 1.0
C A:ARG250 4.8 25.9 1.0
CG A:ASN249 4.8 28.0 1.0
CG A:LEU251 4.9 32.4 1.0

Chlorine binding site 2 out of 2 in 2g9z

Go back to Chlorine Binding Sites List in 2g9z
Chlorine binding site 2 out of 2 in the Thiamin Pyrophosphokinase From Candida Albicans


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Thiamin Pyrophosphokinase From Candida Albicans within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl706

b:28.3
occ:1.00
NE B:ARG250 3.2 18.1 1.0
O B:HOH854 3.3 36.6 1.0
N B:ARG250 3.4 24.7 1.0
NH2 B:ARG250 3.6 17.6 1.0
CB B:ARG250 3.8 23.9 1.0
O B:GLU307 3.8 20.9 1.0
CB B:GLU307 3.9 21.4 1.0
CB B:ASN249 3.9 29.3 1.0
CZ B:ARG250 3.9 19.1 1.0
CA B:GLU307 4.0 20.0 1.0
CG B:ARG250 4.1 22.2 1.0
CG B:GLU307 4.1 21.4 1.0
CA B:ARG250 4.2 24.8 1.0
OE2 B:GLU307 4.2 19.4 1.0
CD B:ARG250 4.2 20.5 1.0
CA B:ASN249 4.3 26.9 1.0
C B:ASN249 4.3 25.2 1.0
C B:GLU307 4.4 19.4 1.0
CD B:GLU307 4.4 23.2 1.0
N B:LEU251 4.5 26.9 1.0
C B:ARG250 4.8 26.1 1.0
CG B:ASN249 4.9 30.5 1.0

Reference:

S.Santini, V.Monchois, N.Mouz, C.Sigoillot, T.Rousselle, J.M.Claverie, C.Abergel. Structural Characterization of CA1462, the Candida Albicans Thiamine Pyrophosphokinase. Bmc Struct.Biol. V. 8 33 2008.
ISSN: ESSN 1472-6807
PubMed: 18652651
DOI: 10.1186/1472-6807-8-33
Page generated: Sat Jul 20 07:24:29 2024

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