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Chlorine in PDB 2go7: Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution

Protein crystallography data

The structure of Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution, PDB code: 2go7 was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.29 / 2.10
Space group P 61
Cell size a, b, c (Å), α, β, γ (°) 155.000, 155.000, 88.440, 90.00, 90.00, 120.00
R / Rfree (%) 17.1 / 20.9

Other elements in 2go7:

The structure of Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution also contains other interesting chemical elements:

Magnesium (Mg) 4 atoms

Chlorine Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 14;

Binding sites:

The binding sites of Chlorine atom in the Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution (pdb code 2go7). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 14 binding sites of Chlorine where determined in the Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution, PDB code: 2go7:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Chlorine binding site 1 out of 14 in 2go7

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Chlorine binding site 1 out of 14 in the Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl208

b:47.8
occ:1.00
 O A:HOH341 3.0 40.5 1.0
N A:GLU123 3.2 28.4 1.0
N A:SER124 3.3 29.3 1.0
C A:GLY121 3.5 29.7 1.0
N A:VAL122 3.7 30.9 1.0
OG A:SER124 3.7 41.7 1.0
CB A:GLU123 3.7 32.0 1.0
O A:GLY121 3.7 31.0 1.0
CA A:GLU123 3.8 32.3 1.0
CA A:GLY121 3.9 31.5 1.0
CB A:SER124 4.0 32.9 1.0
C A:VAL122 4.0 29.5 1.0
C A:GLU123 4.1 31.2 1.0
CA A:VAL122 4.3 28.6 1.0
CA A:SER124 4.3 31.7 1.0
O A:LEU117 4.5 28.8 1.0
CA A:LYS118 4.6 33.3 1.0
O A:LYS118 4.7 32.5 1.0
N A:GLY121 4.7 31.2 1.0
O A:VAL122 5.0 29.1 1.0

Chlorine binding site 2 out of 14 in 2go7

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Chlorine binding site 2 out of 14 in the Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl209

b:44.8
occ:1.00
 O A:HOH330 3.2 27.7 1.0
O A:HOH332 3.3 32.8 1.0
NH1 A:ARG72 3.4 32.6 1.0
O A:HOH331 3.4 34.2 1.0
O A:HOH272 3.7 34.0 1.0
CG2 A:VAL50 3.8 29.2 1.0
CG1 A:VAL50 3.9 28.7 1.0
CG1 A:ILE21 3.9 33.5 1.0
CG2 A:ILE21 4.0 28.0 1.0
CB A:VAL50 4.0 30.4 1.0
CD A:ARG72 4.0 31.3 1.0
CD2 A:LEU76 4.0 26.5 1.0
CZ A:ARG72 4.2 36.1 1.0
CD1 A:ILE21 4.4 28.5 1.0
NE A:ARG72 4.4 33.5 1.0
O A:HOH312 4.5 36.4 1.0
CB A:ILE21 4.5 32.0 1.0
CG A:ARG72 4.8 31.9 1.0

Chlorine binding site 3 out of 14 in 2go7

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Chlorine binding site 3 out of 14 in the Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl210

b:36.8
occ:1.00
 O A:HOH335 2.8 33.4 1.0
N A:LYS139 3.1 31.4 1.0
O A:HOH243 3.1 23.6 1.0
CG A:ARG138 3.3 46.3 1.0
CE A:LYS139 3.6 36.5 1.0
CG A:LYS139 3.6 33.0 1.0
CB A:LYS139 3.8 28.3 1.0
CA A:ARG138 3.8 36.3 1.0
CB A:HIS108 3.8 39.4 1.0
CE2 A:TYR106 3.9 28.8 1.0
N A:HIS108 3.9 32.3 1.0
C A:ARG138 3.9 32.2 1.0
CA A:HIS108 4.0 33.6 1.0
CA A:LYS139 4.0 30.6 1.0
CZ A:TYR106 4.0 29.3 1.0
CB A:ARG138 4.1 37.2 1.0
OH A:TYR106 4.2 29.9 1.0
CD A:LYS139 4.2 31.7 1.0
O A:HOH316 4.2 25.1 1.0
C A:THR107 4.3 31.4 1.0
CD A:ARG138 4.4 55.6 1.0
CD2 A:TYR106 4.5 27.1 1.0
O A:THR107 4.6 31.2 1.0
CE1 A:TYR106 4.7 30.9 1.0
O A:HOH305 4.7 29.7 1.0
O A:LYS139 4.8 30.3 1.0
NZ A:LYS139 4.8 35.9 1.0
C A:LYS139 5.0 30.4 1.0

Chlorine binding site 4 out of 14 in 2go7

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Chlorine binding site 4 out of 14 in the Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl211

b:25.0
occ:1.00
 N B:ARG138 3.3 31.2 1.0
N A:ARG138 3.4 34.0 1.0
CD B:ARG138 3.6 52.9 1.0
CA A:VAL137 3.8 30.9 1.0
CG1 B:VAL137 3.9 29.9 1.0
CB A:ARG138 3.9 37.2 1.0
CB B:ARG138 3.9 36.7 1.0
CA B:VAL137 4.0 28.4 1.0
CG1 A:VAL137 4.0 31.7 1.0
C A:VAL137 4.1 31.7 1.0
C B:VAL137 4.2 30.1 1.0
NE A:ARG138 4.2 53.5 1.0
NH1 B:ARG138 4.2 58.3 1.0
CA B:ARG138 4.2 34.7 1.0
CA A:ARG138 4.2 36.3 1.0
NE B:ARG138 4.3 55.7 1.0
CG B:ARG138 4.3 46.2 1.0
CB A:VAL137 4.4 32.5 1.0
CB B:VAL137 4.4 30.2 1.0
CZ B:ARG138 4.5 60.6 1.0
NH2 A:ARG138 4.5 55.6 1.0
O A:PHE136 4.6 25.9 1.0
CZ A:ARG138 4.7 58.2 1.0
CG2 A:VAL137 4.7 30.1 1.0
CG2 B:VAL137 4.8 30.6 1.0
CG A:ARG138 4.8 46.3 1.0
O B:PHE136 4.9 26.0 1.0
CD A:ARG138 4.9 55.6 1.0
N A:VAL137 5.0 29.1 1.0

Chlorine binding site 5 out of 14 in 2go7

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Chlorine binding site 5 out of 14 in the Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl212

b:27.5
occ:1.00
 OG1 A:THR107 3.0 31.7 1.0
N A:ASP11 3.2 30.1 1.0
O A:HOH214 3.3 24.4 1.0
O A:HOH316 3.3 25.1 1.0
CD2 A:HIS108 3.4 60.3 1.0
CB A:LEU10 3.5 30.3 1.0
OD1 A:ASP9 3.6 26.3 1.0
N A:LEU10 3.7 29.7 1.0
CB A:ASP11 3.9 28.4 1.0
CA A:LEU10 3.9 27.2 1.0
C A:LEU10 4.0 29.8 1.0
CB A:THR107 4.0 30.4 1.0
NE2 A:HIS108 4.0 52.2 1.0
CA A:ASP11 4.1 30.4 1.0
CG A:ASP11 4.2 35.8 1.0
CG A:LYS109 4.3 34.6 1.0
N A:HIS108 4.3 32.3 1.0
CA A:THR107 4.4 30.9 1.0
OD2 A:ASP11 4.5 40.8 1.0
CG A:ASP9 4.5 29.0 1.0
CG A:LEU10 4.6 29.6 1.0
CG A:HIS108 4.6 52.4 1.0
CD A:LYS109 4.6 37.2 1.0
O A:HOH293 4.7 30.9 1.0
CE A:LYS109 4.7 37.7 1.0
N A:LYS109 4.7 28.9 1.0
O A:HOH317 4.7 20.2 1.0
OD1 A:ASP11 4.7 35.6 1.0
C A:THR107 4.9 31.4 1.0
O A:ASP11 4.9 30.4 1.0
MG A:MG207 4.9 27.2 1.0
C A:ASP9 5.0 29.2 1.0
OD2 A:ASP9 5.0 30.5 1.0

Chlorine binding site 6 out of 14 in 2go7

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Chlorine binding site 6 out of 14 in the Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl208

b:40.6
occ:1.00
 N B:GLU123 3.3 30.7 1.0
N B:SER124 3.4 30.2 1.0
N B:VAL122 3.6 31.3 1.0
C B:GLY121 3.6 30.6 1.0
CA B:GLY121 3.8 31.7 1.0
OG B:SER124 3.8 41.7 1.0
CB B:GLU123 3.9 34.7 1.0
CB B:SER124 3.9 33.0 1.0
CA B:GLU123 3.9 33.8 1.0
C B:VAL122 4.0 30.6 1.0
O B:GLY121 4.1 28.5 1.0
C B:GLU123 4.2 31.6 1.0
CA B:VAL122 4.2 29.1 1.0
CA B:SER124 4.3 32.4 1.0
O B:LEU117 4.4 28.1 1.0
CA B:LYS118 4.5 35.0 1.0
N B:GLY121 4.6 31.2 1.0
O B:LYS118 4.7 34.5 1.0
CG B:LYS118 4.8 44.0 1.0
O B:VAL122 4.9 29.4 1.0

Chlorine binding site 7 out of 14 in 2go7

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Chlorine binding site 7 out of 14 in the Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl209

b:28.7
occ:1.00
 OG1 B:THR107 3.0 27.4 1.0
O B:HOH323 3.1 18.8 1.0
N B:ASP11 3.2 29.4 1.0
O B:HOH211 3.3 26.9 1.0
CB B:LEU10 3.5 28.0 1.0
OD1 B:ASP9 3.5 28.1 1.0
N B:LEU10 3.7 29.2 1.0
CA B:LEU10 3.9 29.2 1.0
CB B:ASP11 3.9 30.1 1.0
CB B:THR107 4.0 29.1 1.0
C B:LEU10 4.0 28.8 1.0
CG B:ASP11 4.2 35.0 1.0
CA B:ASP11 4.2 28.6 1.0
O B:HOH330 4.2 47.9 1.0
CG B:LYS109 4.3 35.5 1.0
N B:HIS108 4.4 33.2 1.0
CA B:THR107 4.4 28.8 1.0
OD2 B:ASP11 4.4 35.9 1.0
CG B:LEU10 4.4 28.2 1.0
CE B:LYS109 4.5 38.5 1.0
CG B:ASP9 4.5 31.9 1.0
OD1 B:ASP11 4.6 38.0 1.0
CD B:LYS109 4.7 34.9 1.0
O B:HOH269 4.7 31.9 1.0
CD1 B:LEU10 4.8 27.9 1.0
N B:LYS109 4.8 30.9 1.0
O B:HOH324 4.8 31.4 1.0
OD2 B:ASP9 4.9 29.0 1.0
C B:THR107 4.9 29.5 1.0
C B:ASP9 4.9 30.7 1.0

Chlorine binding site 8 out of 14 in 2go7

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Chlorine binding site 8 out of 14 in the Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 8 of Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl208

b:52.6
occ:1.00
 N C:GLU123 3.3 29.2 1.0
N C:SER124 3.6 32.3 1.0
C C:GLY121 3.6 29.7 1.0
CB C:GLU123 3.7 35.9 1.0
N C:VAL122 3.7 30.6 1.0
OG C:SER124 3.8 40.5 1.0
O C:GLY121 3.9 29.5 1.0
CA C:GLU123 3.9 34.1 1.0
CA C:GLY121 3.9 29.4 1.0
C C:VAL122 4.0 29.0 1.0
CB C:SER124 4.1 33.0 1.0
C C:GLU123 4.2 31.3 1.0
CA C:VAL122 4.3 28.4 1.0
O C:LEU117 4.5 26.7 1.0
CA C:LYS118 4.5 33.5 1.0
CA C:SER124 4.5 32.1 1.0
O C:LYS118 4.6 28.4 1.0
N C:GLY121 4.7 28.5 1.0
CG C:LYS118 4.9 41.2 1.0
O C:VAL122 5.0 29.2 1.0

Chlorine binding site 9 out of 14 in 2go7

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Chlorine binding site 9 out of 14 in the Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 9 of Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl209

b:36.4
occ:1.00
 O C:HOH306 3.2 31.0 1.0
O C:HOH304 3.3 31.3 1.0
NH1 C:ARG72 3.4 36.0 1.0
O C:HOH305 3.5 21.1 1.0
O C:HOH307 3.6 33.4 1.0
CG2 C:VAL50 3.8 28.2 1.0
CD C:ARG72 3.9 32.7 1.0
CD2 C:LEU76 3.9 28.0 1.0
CG1 C:VAL50 3.9 26.9 1.0
CG2 C:ILE21 4.0 27.9 1.0
CG1 C:ILE21 4.1 34.0 1.0
CB C:VAL50 4.1 30.8 1.0
CZ C:ARG72 4.2 31.6 1.0
NE C:ARG72 4.4 32.6 1.0
CB C:ILE21 4.6 30.2 1.0
CD1 C:ILE21 4.7 29.4 1.0
CG C:ARG72 4.7 27.1 1.0
O C:HOH326 4.8 45.8 1.0

Chlorine binding site 10 out of 14 in 2go7

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Chlorine binding site 10 out of 14 in the Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 10 of Crystal Structure of A Hydrolase From Haloacid Dehalogenase-Like Family (SP_2064) From Streptococcus Pneumoniae TIGR4 at 2.10 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl210

b:33.7
occ:1.00
 NH1 C:ARG138 3.2 60.9 1.0
N C:ARG138 3.3 32.5 1.0
N D:ARG138 3.4 32.5 1.0
CA C:VAL137 3.8 29.9 1.0
CB D:ARG138 3.9 36.8 1.0
CA D:VAL137 3.9 30.3 1.0
CG1 D:VAL137 3.9 27.7 1.0
CG C:ARG138 3.9 44.1 1.0
CB C:ARG138 3.9 37.4 1.0
NE D:ARG138 4.0 56.5 1.0
C C:VAL137 4.0 30.1 1.0
CG1 C:VAL137 4.1 29.5 1.0
C D:VAL137 4.2 30.3 1.0
CZ D:ARG138 4.2 60.5 1.0
CA C:ARG138 4.2 35.3 1.0
CA D:ARG138 4.2 33.9 1.0
NH2 D:ARG138 4.2 57.1 1.0
CB C:VAL137 4.3 29.9 1.0
CZ C:ARG138 4.3 57.4 1.0
CG D:ARG138 4.4 46.1 1.0
CB D:VAL137 4.4 32.6 1.0
CD C:ARG138 4.4 47.3 1.0
O C:PHE136 4.5 27.7 1.0
CD D:ARG138 4.6 53.0 1.0
CG2 C:VAL137 4.6 28.9 1.0
O D:PHE136 4.7 27.9 1.0
CG2 D:VAL137 4.8 31.4 1.0
NE C:ARG138 4.8 54.1 1.0
N C:VAL137 4.9 28.2 1.0
NH1 D:ARG138 4.9 61.8 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Sat Jul 20 07:36:38 2024

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