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Chlorine in PDB 2gs3: Crystal Structure of the Selenocysteine to Glycine Mutant of Human Glutathione Peroxidase 4(GPX4)

Enzymatic activity of Crystal Structure of the Selenocysteine to Glycine Mutant of Human Glutathione Peroxidase 4(GPX4)

All present enzymatic activity of Crystal Structure of the Selenocysteine to Glycine Mutant of Human Glutathione Peroxidase 4(GPX4):
1.11.1.12;

Protein crystallography data

The structure of Crystal Structure of the Selenocysteine to Glycine Mutant of Human Glutathione Peroxidase 4(GPX4), PDB code: 2gs3 was solved by C.Johansson, K.L.Kavanagh, A.Rojkova, O.Gileadi, F.Von Delft, C.Arrowsmith, J.Weigelt, M.Sundstrom, A.Edwards, U.Oppermann, Structuralgenomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.90
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 62.945, 62.945, 195.984, 90.00, 90.00, 90.00
R / Rfree (%) 17.2 / 19.1

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Selenocysteine to Glycine Mutant of Human Glutathione Peroxidase 4(GPX4) (pdb code 2gs3). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the Selenocysteine to Glycine Mutant of Human Glutathione Peroxidase 4(GPX4), PDB code: 2gs3:

Chlorine binding site 1 out of 1 in 2gs3

Go back to Chlorine Binding Sites List in 2gs3
Chlorine binding site 1 out of 1 in the Crystal Structure of the Selenocysteine to Glycine Mutant of Human Glutathione Peroxidase 4(GPX4)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Selenocysteine to Glycine Mutant of Human Glutathione Peroxidase 4(GPX4) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl201

b:35.8
occ:1.00
 O A:HOH227 3.2 35.8 1.0
N A:LYS75 3.3 35.7 1.0
ND2 A:ASN164 3.4 36.5 1.0
N A:GLY74 3.5 37.8 1.0
CA A:GLY73 3.6 39.4 1.0
CB A:ASN164 3.7 36.0 1.0
O A:HOH232 3.7 37.1 1.0
C A:GLY73 3.8 40.5 1.0
CB A:LYS75 3.8 38.6 1.0
CD2 A:PHE165 3.9 44.8 1.0
CD1 A:TRP163 3.9 36.9 1.0
CA A:LYS75 4.0 34.9 1.0
NE1 A:TRP163 4.0 41.2 1.0
CG A:ASN164 4.0 40.7 1.0
CE2 A:PHE165 4.1 35.1 1.0
C A:GLY74 4.2 39.8 1.0
CA A:GLY74 4.3 38.5 1.0
C A:LYS75 4.4 34.5 1.0
CG A:LYS75 4.4 45.6 1.0
N A:THR76 4.4 35.8 1.0
O A:GLY73 4.6 40.9 1.0
OE1 A:GLN108 4.6 35.4 1.0
O A:ASN164 4.7 34.5 1.0
CA A:ASN164 4.8 33.8 1.0
N A:GLY73 4.9 36.6 1.0
O A:HOH309 4.9 53.9 1.0
C A:ASN164 4.9 35.7 1.0

Reference:

C.Johansson, K.L.Kavanagh, A.Rojkova, O.Gileadi, F.Von Delft, C.Arrowsmith, J.Weigelt, M.Sundstrom, A.Edwards, U.Oppermann, Structural Genomics Consortium (Sgc). Crystal Structure of the Selenocysteine to Glycine Mutant of Human Glutathione Peroxidase 4(GPX4) To Be Published.
Page generated: Sat Dec 12 09:06:40 2020

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