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Chlorine in PDB 2h6b: Crystal Structure of Oxidized Cprk in Complex with O- Chlorophenolacetic Acid

Protein crystallography data

The structure of Crystal Structure of Oxidized Cprk in Complex with O- Chlorophenolacetic Acid, PDB code: 2h6b was solved by M.G.Joyce, C.Levy, D.Leys, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.92 / 2.20
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 104.437, 112.185, 119.495, 90.00, 90.00, 90.00
R / Rfree (%) 18.3 / 22.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Oxidized Cprk in Complex with O- Chlorophenolacetic Acid (pdb code 2h6b). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Oxidized Cprk in Complex with O- Chlorophenolacetic Acid, PDB code: 2h6b:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2h6b

Go back to Chlorine Binding Sites List in 2h6b
Chlorine binding site 1 out of 2 in the Crystal Structure of Oxidized Cprk in Complex with O- Chlorophenolacetic Acid


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Oxidized Cprk in Complex with O- Chlorophenolacetic Acid within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl302

b:34.2
occ:1.00
CL A:3C4302 0.0 34.2 1.0
CE1 A:3C4302 1.8 32.4 1.0
CD1 A:3C4302 2.7 35.0 1.0
CZ A:3C4302 2.8 30.1 1.0
OH A:3C4302 3.2 34.2 1.0
NZ A:LYS133 3.6 29.9 1.0
CE2 A:TYR130 3.6 34.2 1.0
CD A:LYS133 3.8 32.4 1.0
CA A:GLY85 3.8 34.5 1.0
O A:HOH305 3.8 30.2 1.0
N A:GLY85 3.8 34.0 1.0
CD1 B:LEU131 3.8 32.1 1.0
CG1 B:VAL134 3.9 32.8 1.0
C A:GLY85 3.9 34.8 1.0
O A:GLY85 4.0 35.0 1.0
CD2 A:TYR130 4.0 34.2 1.0
CA A:3C4302 4.0 34.2 1.0
CE2 A:3C4302 4.1 34.1 1.0
CB B:VAL134 4.2 31.9 1.0
CG2 B:VAL134 4.2 32.3 1.0
CE A:LYS133 4.2 32.2 1.0
CD2 A:3C4302 4.5 34.5 1.0
CZ A:TYR130 4.7 34.1 1.0
N A:LYS86 4.7 36.0 1.0

Chlorine binding site 2 out of 2 in 2h6b

Go back to Chlorine Binding Sites List in 2h6b
Chlorine binding site 2 out of 2 in the Crystal Structure of Oxidized Cprk in Complex with O- Chlorophenolacetic Acid


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Oxidized Cprk in Complex with O- Chlorophenolacetic Acid within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl301

b:33.8
occ:1.00
CL B:3C4301 0.0 33.8 1.0
CE1 B:3C4301 1.8 35.9 1.0
CD1 B:3C4301 2.7 33.5 1.0
CZ B:3C4301 2.8 35.7 1.0
OH B:3C4301 3.2 36.1 1.0
NZ B:LYS133 3.4 30.5 1.0
CA B:GLY85 3.6 31.7 1.0
CE2 B:TYR130 3.7 29.8 1.0
N B:GLY85 3.8 32.9 1.0
O B:HOH302 3.8 26.9 1.0
CD B:LYS133 3.9 31.1 1.0
CD1 A:LEU131 3.9 32.9 1.0
C B:GLY85 3.9 32.1 1.0
O B:GLY85 4.0 33.6 1.0
CG1 A:VAL134 4.0 34.4 1.0
CA B:3C4301 4.0 34.8 1.0
CD2 B:TYR130 4.1 31.6 1.0
CE2 B:3C4301 4.1 35.1 1.0
CB A:VAL134 4.3 34.2 1.0
CE B:LYS133 4.3 29.3 1.0
CG2 A:VAL134 4.3 36.4 1.0
CD2 B:3C4301 4.5 35.1 1.0
N B:LYS86 4.7 34.2 1.0
CZ B:TYR130 4.8 31.7 1.0

Reference:

M.G.Joyce, C.Levy, S.M.Pop, B.D.Biehl, T.I.Doukov, J.M.Ryter, H.Mazon, H.Smidt, R.H.Van Den Heuvel, S.W.Ragsdale, J.Van Der Oost, D.Leys. Cprk Crystal Structures Reveal Mechanism For Transcriptional Control of Halorespiration. J.Biol.Chem. V. 281 28318 2006.
ISSN: ISSN 0021-9258
PubMed: 16803881
DOI: 10.1074/JBC.M602654200
Page generated: Sat Dec 12 09:06:57 2020

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