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Chlorine in PDB 2hrw: Crystal Structure of Phosphonopyruvate Hydrolase

Protein crystallography data

The structure of Crystal Structure of Phosphonopyruvate Hydrolase, PDB code: 2hrw was solved by C.C.H.Chen, O.Herzberg, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.62 / 2.20
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 74.880, 79.020, 93.440, 90.00, 90.00, 90.00
R / Rfree (%) 20.4 / 27.1

Other elements in 2hrw:

The structure of Crystal Structure of Phosphonopyruvate Hydrolase also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Phosphonopyruvate Hydrolase (pdb code 2hrw). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Phosphonopyruvate Hydrolase, PDB code: 2hrw:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 2hrw

Go back to Chlorine Binding Sites List in 2hrw
Chlorine binding site 1 out of 2 in the Crystal Structure of Phosphonopyruvate Hydrolase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Phosphonopyruvate Hydrolase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl376

b:22.9
occ:0.50
NA A:NA309 2.7 36.3 1.0
O A:HOH371 2.8 37.1 1.0
CE A:MET66 3.4 25.4 1.0
CL A:CL472 3.8 28.4 0.5
OH A:TYR50 4.1 31.2 1.0
CE2 A:TYR50 4.4 29.4 1.0
CZ A:TYR50 4.5 29.3 1.0
O A:HIS23 4.7 26.6 1.0
CB A:ASN24 5.0 29.4 1.0

Chlorine binding site 2 out of 2 in 2hrw

Go back to Chlorine Binding Sites List in 2hrw
Chlorine binding site 2 out of 2 in the Crystal Structure of Phosphonopyruvate Hydrolase


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Phosphonopyruvate Hydrolase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl472

b:28.4
occ:0.50
NA A:NA309 2.8 36.3 1.0
ND2 A:ASN24 2.9 30.1 1.0
CD2 A:HIS23 3.6 25.8 1.0
CB A:ASN24 3.7 29.4 1.0
CG A:ASN24 3.8 31.4 1.0
CL A:CL376 3.8 22.9 0.5
O A:HIS23 4.3 26.6 1.0
NE2 A:HIS23 4.3 30.5 1.0
O A:HOH346 4.5 28.5 1.0
CB A:SER49 4.6 26.2 1.0
OG A:SER49 4.6 29.3 1.0
CG A:HIS23 4.7 26.5 1.0
C A:HIS23 4.8 26.2 1.0
CA A:ASN24 4.9 28.0 1.0
OD1 A:ASN24 4.9 31.9 1.0

Reference:

C.C.H.Chen, Y.Han, W.Niu, A.N.Kulakova, A.Howard, J.P.Quinn, D.Dunaway-Mariano, O.Herzberg. Structure and Kinetics of Phosphonopyruvate Hydrolase From Voriovorax Sp. PAL2: New Insight Into the Divergence of Catalysis Within the Pep Mutase/Isocitrate Lyase Superfamily Biochemistry V. 45 11491 2006.
ISSN: ISSN 0006-2960
PubMed: 16981709
DOI: 10.1021/BI061208L
Page generated: Sat Jul 20 07:54:47 2024

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