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Chlorine in PDB 2i58: Crystal Structure of Rafe From Streptococcus Pneumoniae Complexed with Raffinose

Protein crystallography data

The structure of Crystal Structure of Rafe From Streptococcus Pneumoniae Complexed with Raffinose, PDB code: 2i58 was solved by N.G.Paterson, A.Riboldi-Tunnicliffe, T.J.Mitchell, N.W.Isaacs, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.27 / 2.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 49.214, 119.435, 146.326, 90.00, 90.00, 90.00
R / Rfree (%) 21.1 / 29.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Rafe From Streptococcus Pneumoniae Complexed with Raffinose (pdb code 2i58). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of Rafe From Streptococcus Pneumoniae Complexed with Raffinose, PDB code: 2i58:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 2i58

Go back to Chlorine Binding Sites List in 2i58
Chlorine binding site 1 out of 3 in the Crystal Structure of Rafe From Streptococcus Pneumoniae Complexed with Raffinose


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Rafe From Streptococcus Pneumoniae Complexed with Raffinose within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl389

b:34.0
occ:1.00
N B:ALA357 3.3 62.9 1.0
N B:GLU356 3.3 61.2 1.0
CB B:ALA357 3.7 64.8 1.0
CB B:SER355 3.9 65.6 1.0
CG B:GLU356 4.0 59.5 1.0
CA B:ALA357 4.0 63.5 1.0
CA B:GLU356 4.1 60.2 1.0
C B:GLU356 4.1 61.2 1.0
C B:SER355 4.2 61.6 1.0
CA B:SER355 4.3 63.6 1.0
OG B:SER355 4.5 65.3 1.0
CB B:GLU356 4.6 58.4 1.0

Chlorine binding site 2 out of 3 in 2i58

Go back to Chlorine Binding Sites List in 2i58
Chlorine binding site 2 out of 3 in the Crystal Structure of Rafe From Streptococcus Pneumoniae Complexed with Raffinose


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Rafe From Streptococcus Pneumoniae Complexed with Raffinose within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl389

b:34.9
occ:1.00
N A:GLU356 3.7 55.5 1.0
CB A:SER355 4.0 59.5 1.0
N A:ALA357 4.1 53.4 1.0
CG A:GLU356 4.1 55.0 1.0
CA A:SER355 4.2 58.5 1.0
C A:SER355 4.5 56.6 1.0
CB A:ALA357 4.7 53.3 1.0
CA A:GLU356 4.7 53.9 1.0
OE2 A:GLU70 4.7 68.7 1.0
C A:GLU356 4.8 53.1 1.0
OE2 A:GLU47 4.8 85.5 1.0
CA A:ALA357 4.9 52.0 1.0

Chlorine binding site 3 out of 3 in 2i58

Go back to Chlorine Binding Sites List in 2i58
Chlorine binding site 3 out of 3 in the Crystal Structure of Rafe From Streptococcus Pneumoniae Complexed with Raffinose


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Rafe From Streptococcus Pneumoniae Complexed with Raffinose within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl390

b:36.5
occ:1.00
CE B:LYS217 3.5 64.4 1.0
NZ B:LYS217 3.5 61.8 1.0
N B:GLY215 3.7 80.6 1.0
CA B:GLY215 4.3 78.9 1.0
N B:SER216 4.3 71.9 1.0
O B:ILE213 4.5 74.7 1.0
N B:LYS217 4.5 67.0 1.0
C B:GLY215 4.7 74.7 1.0
CB B:LYS217 4.7 64.9 1.0
C B:ASN214 4.7 81.4 1.0
OG B:SER216 4.8 65.2 1.0
CD B:LYS217 4.9 61.3 1.0
CA B:ASN214 4.9 83.5 1.0
O B:LYS217 4.9 69.7 1.0

Reference:

N.G.Paterson, A.Riboldi-Tunnicliffe, T.J.Mitchell, N.W.Isaacs. Crystal Structure of Apo and Bound Forms of Rafe From Streptococcus Pneumoniae To Be Published.
Page generated: Sat Dec 12 09:08:11 2020

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