Chlorine in PDB 2i6h: Structure of Protein of Unknown Function ATU0120 From Agrobacterium Tumefaciens
Protein crystallography data
The structure of Structure of Protein of Unknown Function ATU0120 From Agrobacterium Tumefaciens, PDB code: 2i6h
was solved by
J.Osipiuk,
X.Xu,
J.Gu,
A.Savchenko,
A.Edwards,
A.Joachimiak,
Midwest Centerfor Structural Genomics (Mcsg),
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
37.00 /
1.75
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
39.490,
101.193,
103.656,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
16.6 /
19.9
|
Other elements in 2i6h:
The structure of Structure of Protein of Unknown Function ATU0120 From Agrobacterium Tumefaciens also contains other interesting chemical elements:
Chlorine Binding Sites:
The binding sites of Chlorine atom in the Structure of Protein of Unknown Function ATU0120 From Agrobacterium Tumefaciens
(pdb code 2i6h). This binding sites where shown within
5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the
Structure of Protein of Unknown Function ATU0120 From Agrobacterium Tumefaciens, PDB code: 2i6h:
Jump to Chlorine binding site number:
1;
2;
3;
Chlorine binding site 1 out
of 3 in 2i6h
Go back to
Chlorine Binding Sites List in 2i6h
Chlorine binding site 1 out
of 3 in the Structure of Protein of Unknown Function ATU0120 From Agrobacterium Tumefaciens
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 1 of Structure of Protein of Unknown Function ATU0120 From Agrobacterium Tumefaciens within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cl505
b:23.9
occ:1.00
|
O
|
A:HOH679
|
3.1
|
34.2
|
1.0
|
CD2
|
A:HIS159
|
3.2
|
23.4
|
0.6
|
N
|
A:HIS159
|
3.2
|
16.3
|
1.0
|
OH
|
A:TYR175
|
3.3
|
29.8
|
1.0
|
CD
|
A:PRO158
|
3.4
|
14.8
|
1.0
|
CB
|
A:HIS159
|
3.5
|
17.9
|
0.4
|
CB
|
A:HIS159
|
3.5
|
18.5
|
0.6
|
N
|
A:PRO158
|
3.5
|
15.7
|
1.0
|
CG
|
A:HIS159
|
3.6
|
20.6
|
0.6
|
CB
|
A:PHE157
|
3.7
|
13.5
|
1.0
|
CA
|
A:PHE157
|
3.7
|
13.9
|
1.0
|
C
|
A:PHE157
|
3.7
|
14.4
|
1.0
|
CE2
|
A:TYR175
|
3.8
|
32.6
|
1.0
|
CA
|
A:HIS159
|
3.9
|
16.8
|
0.4
|
CD1
|
A:PHE157
|
3.9
|
13.1
|
1.0
|
CA
|
A:HIS159
|
3.9
|
16.8
|
0.6
|
CG2
|
A:ILE150
|
4.0
|
11.8
|
1.0
|
CZ
|
A:TYR175
|
4.0
|
31.6
|
1.0
|
C
|
A:PRO158
|
4.2
|
15.5
|
1.0
|
CA
|
A:PRO158
|
4.3
|
15.7
|
1.0
|
CG
|
A:PHE157
|
4.3
|
12.6
|
1.0
|
CD1
|
A:ILE150
|
4.3
|
16.0
|
1.0
|
NE2
|
A:HIS159
|
4.4
|
25.3
|
0.6
|
O
|
A:PHE157
|
4.5
|
14.2
|
1.0
|
CB
|
A:PRO158
|
4.5
|
15.0
|
1.0
|
CG
|
A:PRO158
|
4.5
|
17.9
|
1.0
|
CG
|
A:HIS159
|
4.8
|
20.3
|
0.4
|
ND1
|
A:HIS159
|
4.9
|
24.9
|
0.6
|
|
Chlorine binding site 2 out
of 3 in 2i6h
Go back to
Chlorine Binding Sites List in 2i6h
Chlorine binding site 2 out
of 3 in the Structure of Protein of Unknown Function ATU0120 From Agrobacterium Tumefaciens
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 2 of Structure of Protein of Unknown Function ATU0120 From Agrobacterium Tumefaciens within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl504
b:22.0
occ:1.00
|
O
|
A:HOH599
|
2.8
|
23.9
|
1.0
|
O
|
B:HOH593
|
2.9
|
21.3
|
1.0
|
O
|
A:HOH605
|
3.1
|
21.0
|
1.0
|
N
|
B:LEU139
|
3.2
|
12.6
|
1.0
|
N
|
B:TYR140
|
3.5
|
13.7
|
1.0
|
CE2
|
A:TYR140
|
3.6
|
15.1
|
1.0
|
CD2
|
B:TYR140
|
3.7
|
13.9
|
1.0
|
CA
|
B:LEU139
|
3.9
|
13.4
|
1.0
|
CB
|
B:LEU139
|
3.9
|
11.6
|
1.0
|
C
|
B:GLY138
|
4.0
|
14.1
|
1.0
|
CG
|
B:TYR140
|
4.0
|
13.2
|
1.0
|
CA
|
B:GLY138
|
4.1
|
13.1
|
1.0
|
C
|
B:LEU139
|
4.2
|
13.0
|
1.0
|
CE2
|
B:TYR140
|
4.2
|
14.9
|
1.0
|
O
|
B:GLY137
|
4.2
|
13.4
|
1.0
|
CD2
|
A:TYR140
|
4.2
|
14.8
|
1.0
|
CB
|
B:TYR140
|
4.4
|
13.8
|
1.0
|
CZ
|
A:TYR140
|
4.5
|
14.8
|
1.0
|
CA
|
B:TYR140
|
4.5
|
13.4
|
1.0
|
OH
|
A:TYR140
|
4.6
|
15.0
|
1.0
|
CD1
|
B:TYR140
|
4.7
|
15.3
|
1.0
|
O
|
A:HOH652
|
4.7
|
27.4
|
1.0
|
CA
|
B:CA503
|
4.7
|
19.9
|
0.8
|
CZ
|
B:TYR140
|
4.8
|
13.6
|
1.0
|
CG
|
B:LEU139
|
4.8
|
14.1
|
1.0
|
O
|
B:HOH582
|
4.9
|
22.6
|
1.0
|
C
|
B:GLY137
|
5.0
|
13.6
|
1.0
|
N
|
B:GLY138
|
5.0
|
13.2
|
1.0
|
CE1
|
B:TYR140
|
5.0
|
15.3
|
1.0
|
|
Chlorine binding site 3 out
of 3 in 2i6h
Go back to
Chlorine Binding Sites List in 2i6h
Chlorine binding site 3 out
of 3 in the Structure of Protein of Unknown Function ATU0120 From Agrobacterium Tumefaciens
 Mono view
 Stereo pair view
|
A full contact list of Chlorine with other atoms in the Cl binding
site number 3 of Structure of Protein of Unknown Function ATU0120 From Agrobacterium Tumefaciens within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Cl506
b:29.3
occ:1.00
|
ND1
|
B:HIS159
|
2.9
|
17.4
|
0.5
|
N
|
B:HIS159
|
3.1
|
17.7
|
1.0
|
CD2
|
B:HIS159
|
3.2
|
24.2
|
0.5
|
CD
|
B:PRO158
|
3.3
|
19.4
|
1.0
|
N
|
B:PRO158
|
3.4
|
18.2
|
1.0
|
CB
|
B:HIS159
|
3.5
|
18.9
|
0.5
|
CB
|
B:HIS159
|
3.5
|
17.7
|
0.5
|
CG
|
B:HIS159
|
3.6
|
17.3
|
0.5
|
C
|
B:PHE157
|
3.6
|
17.1
|
1.0
|
CA
|
B:PHE157
|
3.7
|
15.4
|
1.0
|
CG
|
B:HIS159
|
3.7
|
21.6
|
0.5
|
CB
|
B:PHE157
|
3.7
|
15.2
|
1.0
|
OH
|
B:TYR175
|
3.8
|
29.1
|
0.5
|
CA
|
B:HIS159
|
3.9
|
17.7
|
0.5
|
CA
|
B:HIS159
|
3.9
|
17.0
|
0.5
|
CG2
|
B:ILE150
|
3.9
|
19.2
|
1.0
|
CE2
|
B:TYR175
|
3.9
|
27.9
|
0.5
|
CE1
|
B:HIS159
|
3.9
|
18.2
|
0.5
|
CD1
|
B:PHE157
|
4.0
|
14.5
|
1.0
|
C
|
B:PRO158
|
4.1
|
18.4
|
1.0
|
CE2
|
B:TYR175
|
4.1
|
30.9
|
0.5
|
CA
|
B:PRO158
|
4.1
|
19.6
|
1.0
|
CB
|
B:PRO158
|
4.3
|
20.4
|
1.0
|
CZ
|
B:TYR175
|
4.3
|
28.0
|
0.5
|
CD1
|
B:ILE150
|
4.3
|
21.2
|
1.0
|
CG
|
B:PRO158
|
4.4
|
21.1
|
1.0
|
CG
|
B:PHE157
|
4.4
|
12.9
|
1.0
|
O
|
B:PHE157
|
4.4
|
15.5
|
1.0
|
OH
|
B:TYR175
|
4.4
|
30.1
|
0.5
|
NE2
|
B:HIS159
|
4.5
|
25.0
|
0.5
|
CZ
|
B:TYR175
|
4.7
|
30.8
|
0.5
|
CD2
|
B:HIS159
|
4.8
|
18.0
|
0.5
|
CG1
|
B:ILE150
|
5.0
|
20.5
|
1.0
|
CB
|
B:ILE150
|
5.0
|
20.7
|
1.0
|
NE2
|
B:HIS159
|
5.0
|
20.3
|
0.5
|
|
Reference:
J.Osipiuk,
X.Xu,
J.Gu,
A.Savchenko,
A.Edwards,
A.Joachimiak.
X-Ray Crystal Structure of Hypothetical Protein ATU0120 From Agrobacterium Tumefaciens. To Be Published.
Page generated: Sat Jul 20 08:04:55 2024
|