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Chlorine in PDB 2id8: Crystal Structure of Proteinase K

Enzymatic activity of Crystal Structure of Proteinase K

All present enzymatic activity of Crystal Structure of Proteinase K:
3.4.21.64;

Protein crystallography data

The structure of Crystal Structure of Proteinase K, PDB code: 2id8 was solved by J.Wang, M.Dauter, Z.Dauter, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 1.27
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 67.550, 67.550, 106.880, 90.00, 90.00, 90.00
R / Rfree (%) 12.4 / 15.9

Other elements in 2id8:

The structure of Crystal Structure of Proteinase K also contains other interesting chemical elements:

Calcium (Ca) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Proteinase K (pdb code 2id8). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Proteinase K, PDB code: 2id8:

Chlorine binding site 1 out of 1 in 2id8

Go back to Chlorine Binding Sites List in 2id8
Chlorine binding site 1 out of 1 in the Crystal Structure of Proteinase K


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Proteinase K within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl601

b:31.8
occ:0.82
N A:LYS57 3.5 7.2 1.0
C A:VAL56 3.7 7.5 1.0
CB A:SER63 3.8 12.5 1.0
CA A:LYS57 3.8 7.2 1.0
O A:HOH747 3.8 13.6 1.0
CB A:MET55 3.9 8.3 1.0
C A:LYS57 3.9 6.2 1.0
C A:MET55 4.0 8.6 1.0
N A:VAL56 4.1 6.5 1.0
N A:THR58 4.1 7.4 1.0
O A:MET55 4.1 10.6 1.0
O A:VAL56 4.1 9.3 1.0
CA A:VAL56 4.2 7.3 1.0
CG2 A:THR58 4.3 11.4 1.0
OG A:SER63 4.4 17.8 1.0
O A:LYS57 4.5 7.0 1.0
O A:HOH835 4.5 26.1 1.0
CA A:MET55 4.6 6.9 1.0
CB A:THR58 4.7 8.0 1.0
CE A:MET55 4.9 7.7 1.0
CA A:SER63 5.0 9.8 1.0
CG A:MET55 5.0 7.2 1.0

Reference:

J.Wang, M.Dauter, Z.Dauter. What Can Be Done with A Good Crystal and An Accurate Beamline? Acta Crystallogr.,Sect.D V. 62 1475 2006.
ISSN: ISSN 0907-4449
PubMed: 17139083
DOI: 10.1107/S0907444906038534
Page generated: Sat Jul 20 08:10:37 2024

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