Chlorine in PDB 2j08: Thermus Dna Photolyase with 8-Iod-Riboflavin Antenna Chromophore

All present enzymatic activity of Thermus Dna Photolyase with 8-Iod-Riboflavin Antenna Chromophore:
4.1.99.3;

The structure of Thermus Dna Photolyase with 8-Iod-Riboflavin Antenna Chromophore, PDB code: 2j08 was solved by T.Klar, G.Kaiser, U.Hennecke, T.Carell, A.Batschauer, L.-O.Essen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	24.32 / 2.61
Space group	P 61 2 2
Cell size a, b, c (Å), α, β, γ (°)	112.620, 112.620, 140.262, 90.00, 90.00, 120.00
R / Rfree (%)	16.3 / 25.6

The structure of Thermus Dna Photolyase with 8-Iod-Riboflavin Antenna Chromophore also contains other interesting chemical elements:

Iodine

(I)

1 atom

The binding sites of Chlorine atom in the Thermus Dna Photolyase with 8-Iod-Riboflavin Antenna Chromophore (pdb code 2j08). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Thermus Dna Photolyase with 8-Iod-Riboflavin Antenna Chromophore, PDB code: 2j08:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Thermus Dna Photolyase with 8-Iod-Riboflavin Antenna Chromophore


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Thermus Dna Photolyase with 8-Iod-Riboflavin Antenna Chromophore within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl901 b:57.4 occ:1.00 O A:HOH2045 3.0 29.6 1.0 ND1 A:HIS117 3.5 11.0 1.0 CE1 A:HIS117 4.3 9.2 1.0 CA A:HIS117 4.4 11.7 1.0 CG A:HIS117 4.5 13.2 1.0 CB A:HIS117 4.6 9.5 1.0 O A:LEU116 4.7 23.8 1.0

Chlorine binding site 2 out of 2 in the Thermus Dna Photolyase with 8-Iod-Riboflavin Antenna Chromophore


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Thermus Dna Photolyase with 8-Iod-Riboflavin Antenna Chromophore within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl902 b:51.0 occ:1.00 O A:PRO148 3.0 19.5 1.0 C A:PRO148 4.0 18.8 1.0 NH1 A:ARG224 4.2 11.3 1.0 CD2 A:LEU150 4.3 15.3 1.0 N A:PRO148 4.4 17.7 1.0 CD A:PRO148 4.5 16.9 1.0 CA A:PRO148 4.6 19.8 1.0 CB A:PRO148 4.6 20.6 1.0 CZ A:ARG224 4.7 18.8 1.0 O A:HOH2079 4.7 33.0 1.0 CG A:LEU150 4.7 14.6 1.0 CB A:ALA147 4.7 18.1 1.0 NH2 A:ARG224 4.9 12.6 1.0 CG A:PRO148 4.9 21.0 1.0 O A:HOH2080 4.9 27.3 1.0 C A:ALA147 5.0 16.9 1.0

T.Klar, G.Kaiser, U.Hennecke, T.Carell, A.Batschauer, L.-O.Essen. Natural and Non-Natural Antenna Chromophores in the Dna Photolyase From Thermus Thermophilus Chembiochem V. 7 1798 2006.
ISSN: ISSN 1439-4227
PubMed: 17051659
DOI: 10.1002/CBIC.200600206